Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383513 |
| length | 1016 |
| lncRNA type | read_through |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G323773 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 20389241 ~ 20436040 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383506 | lncRNA | downstream | 12927 | 20370626 ~ 20376314 (-) | True | LOC117599978 |
| XR_004580324.1 | lncRNA | downstream | 18347 | 20370564 ~ 20370894 (-) | False | LOC117599978 |
| TU383429 | lncRNA | downstream | 204109 | 20129253 ~ 20185132 (-) | True | G323709 |
| TU383418 | lncRNA | downstream | 208680 | 20121770 ~ 20180561 (-) | True | G323706 |
| XR_004580349.1 | lncRNA | downstream | 572176 | 19815214 ~ 19817065 (-) | True | LOC117599996 |
| TU383516 | lncRNA | upstream | 8944 | 20444984 ~ 20446212 (-) | True | G323775 |
| TU383530 | lncRNA | upstream | 34090 | 20470130 ~ 20471017 (-) | True | G323787 |
| XR_004580297.1 | lncRNA | upstream | 46034 | 20482074 ~ 20493538 (-) | False | LOC117599955 |
| TU383538 | lncRNA | upstream | 46269 | 20482309 ~ 20527256 (-) | False | LOC117599955 |
| TU383544 | lncRNA | upstream | 59662 | 20495702 ~ 20501519 (-) | True | G323797 |
| XM_034314775.1 | mRNA | downstream | 14570 | 20370971 ~ 20374671 (-) | True | LOC117599977 |
| XM_026946206.2 | mRNA | downstream | 38587 | 20338178 ~ 20350654 (-) | False | LOC113546384 |
| XM_026946205.2 | mRNA | downstream | 38587 | 20338178 ~ 20350654 (-) | True | LOC113546384 |
| XM_026946165.2 | mRNA | downstream | 53526 | 20302600 ~ 20335715 (-) | True | eif4g1a |
| XM_026946341.2 | mRNA | downstream | 89096 | 20284856 ~ 20300145 (-) | True | fam131a |
| XM_034314710.1 | mRNA | upstream | 449 | 20436489 ~ 20444429 (-) | True | ppp1r7 |
| XM_034314848.1 | mRNA | upstream | 14408 | 20450448 ~ 20461880 (-) | True | gk5 |
| XM_034297728.1 | mRNA | upstream | 25975 | 20462015 ~ 20469569 (-) | True | LOC113546455 |
| XM_034314890.1 | mRNA | upstream | 264858 | 20700898 ~ 20714017 (-) | True | sh3glb1b |
| XM_034314622.1 | mRNA | upstream | 296561 | 20732601 ~ 20757942 (-) | True | LOC113524963 |
| XR_004576925.1 | other | downstream | 74029 | 20315137 ~ 20315212 (-) | True | LOC117595748 |
| XR_003404720.2 | other | downstream | 79668 | 20309497 ~ 20309573 (-) | True | LOC113546475 |
| TU383446 | other | downstream | 193569 | 20195294 ~ 20195672 (-) | True | G323726 |
| XR_004580317.1 | other | downstream | 882044 | 19498561 ~ 19507197 (-) | False | kdm4ab |
| TU382527 | other | downstream | 1311324 | 19075000 ~ 19077917 (-) | False | G323011 |
| TU383528 | other | upstream | 31570 | 20467610 ~ 20469469 (-) | False | LOC113546455 |
| TU383651 | other | upstream | 274657 | 20710697 ~ 20713991 (-) | False | sh3glb1b |
| TU383689 | other | upstream | 391986 | 20828026 ~ 20830104 (-) | True | G323902 |
| TU383704 | other | upstream | 525386 | 20961426 ~ 20969169 (-) | False | LOC113524960 |
| TU383705 | other | upstream | 525533 | 20961573 ~ 20976337 (-) | False | LOC113524960 |
