Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383524 |
| length | 231 |
| lncRNA type | intronic |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G323782 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 20428106 ~ 20428391 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383506 | lncRNA | downstream | 51792 | 20370626 ~ 20376314 (-) | True | LOC117599978 |
| XR_004580324.1 | lncRNA | downstream | 57212 | 20370564 ~ 20370894 (-) | False | LOC117599978 |
| TU383429 | lncRNA | downstream | 242974 | 20129253 ~ 20185132 (-) | True | G323709 |
| TU383418 | lncRNA | downstream | 247545 | 20121770 ~ 20180561 (-) | True | G323706 |
| XR_004580349.1 | lncRNA | downstream | 611041 | 19815214 ~ 19817065 (-) | True | LOC117599996 |
| TU383516 | lncRNA | upstream | 16593 | 20444984 ~ 20446212 (-) | True | G323775 |
| TU383530 | lncRNA | upstream | 41739 | 20470130 ~ 20471017 (-) | True | G323787 |
| XR_004580297.1 | lncRNA | upstream | 53683 | 20482074 ~ 20493538 (-) | False | LOC117599955 |
| TU383538 | lncRNA | upstream | 53918 | 20482309 ~ 20527256 (-) | False | LOC117599955 |
| TU383544 | lncRNA | upstream | 67311 | 20495702 ~ 20501519 (-) | True | G323797 |
| XM_034314778.1 | mRNA | downstream | 22904 | 20388826 ~ 20405202 (-) | True | LOC113546371 |
| XM_034314775.1 | mRNA | downstream | 53435 | 20370971 ~ 20374671 (-) | True | LOC117599977 |
| XM_026946206.2 | mRNA | downstream | 77452 | 20338178 ~ 20350654 (-) | False | LOC113546384 |
| XM_026946205.2 | mRNA | downstream | 77452 | 20338178 ~ 20350654 (-) | True | LOC113546384 |
| XM_026946165.2 | mRNA | downstream | 92391 | 20302600 ~ 20335715 (-) | True | eif4g1a |
| XM_034314710.1 | mRNA | upstream | 8098 | 20436489 ~ 20444429 (-) | True | ppp1r7 |
| XM_034314848.1 | mRNA | upstream | 22057 | 20450448 ~ 20461880 (-) | True | gk5 |
| XM_034297728.1 | mRNA | upstream | 33624 | 20462015 ~ 20469569 (-) | True | LOC113546455 |
| XM_034314890.1 | mRNA | upstream | 272507 | 20700898 ~ 20714017 (-) | True | sh3glb1b |
| XM_034314622.1 | mRNA | upstream | 304210 | 20732601 ~ 20757942 (-) | True | LOC113524963 |
| TU383462 | other | downstream | 16300 | 20384201 ~ 20411806 (-) | False | LOC113546371 |
| XR_004576925.1 | other | downstream | 112894 | 20315137 ~ 20315212 (-) | True | LOC117595748 |
| XR_003404720.2 | other | downstream | 118533 | 20309497 ~ 20309573 (-) | True | LOC113546475 |
| TU383446 | other | downstream | 232434 | 20195294 ~ 20195672 (-) | True | G323726 |
| XR_004580317.1 | other | downstream | 920909 | 19498561 ~ 19507197 (-) | False | kdm4ab |
| TU383528 | other | upstream | 39219 | 20467610 ~ 20469469 (-) | False | LOC113546455 |
| TU383651 | other | upstream | 282306 | 20710697 ~ 20713991 (-) | False | sh3glb1b |
| TU383689 | other | upstream | 399635 | 20828026 ~ 20830104 (-) | True | G323902 |
| TU383704 | other | upstream | 533035 | 20961426 ~ 20969169 (-) | False | LOC113524960 |
| TU383705 | other | upstream | 533182 | 20961573 ~ 20976337 (-) | False | LOC113524960 |
