Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383530 |
| length | 837 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G323787 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 20470130 ~ 20471017 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383516 | lncRNA | downstream | 23918 | 20444984 ~ 20446212 (-) | True | G323775 |
| TU383523 | lncRNA | downstream | 27758 | 20417610 ~ 20442372 (-) | False | G323781 |
| TU383522 | lncRNA | downstream | 28670 | 20417610 ~ 20441460 (-) | True | G323781 |
| TU383513 | lncRNA | downstream | 34090 | 20389241 ~ 20436040 (-) | True | G323773 |
| TU383524 | lncRNA | downstream | 41739 | 20428106 ~ 20428391 (-) | True | G323782 |
| XR_004580297.1 | lncRNA | upstream | 11057 | 20482074 ~ 20493538 (-) | False | LOC117599955 |
| TU383538 | lncRNA | upstream | 11292 | 20482309 ~ 20527256 (-) | False | LOC117599955 |
| TU383544 | lncRNA | upstream | 24685 | 20495702 ~ 20501519 (-) | True | G323797 |
| TU383545 | lncRNA | upstream | 24685 | 20495702 ~ 20501519 (-) | False | G323797 |
| TU383550 | lncRNA | upstream | 43256 | 20514273 ~ 20515241 (-) | True | G323799 |
| XM_034297728.1 | mRNA | downstream | 561 | 20462015 ~ 20469569 (-) | True | LOC113546455 |
| XM_034314848.1 | mRNA | downstream | 8250 | 20450448 ~ 20461880 (-) | True | gk5 |
| XM_034314710.1 | mRNA | downstream | 25701 | 20436489 ~ 20444429 (-) | True | ppp1r7 |
| XM_034314709.1 | mRNA | downstream | 36588 | 20422172 ~ 20433542 (-) | True | ubxn7 |
| XM_034314778.1 | mRNA | downstream | 64928 | 20388826 ~ 20405202 (-) | True | LOC113546371 |
| XM_034314890.1 | mRNA | upstream | 229881 | 20700898 ~ 20714017 (-) | True | sh3glb1b |
| XM_034314622.1 | mRNA | upstream | 261584 | 20732601 ~ 20757942 (-) | True | LOC113524963 |
| XM_026911354.2 | mRNA | upstream | 303015 | 20774032 ~ 20780151 (-) | True | amy2a |
| XM_034314686.1 | mRNA | upstream | 422726 | 20893743 ~ 20943796 (-) | True | abca4b |
| XM_034297737.1 | mRNA | upstream | 475119 | 20946136 ~ 20976372 (-) | True | LOC113524960 |
| TU383528 | other | downstream | 661 | 20467610 ~ 20469469 (-) | False | LOC113546455 |
| TU383462 | other | downstream | 58324 | 20384201 ~ 20411806 (-) | False | LOC113546371 |
| XR_004576925.1 | other | downstream | 154918 | 20315137 ~ 20315212 (-) | True | LOC117595748 |
| XR_003404720.2 | other | downstream | 160557 | 20309497 ~ 20309573 (-) | True | LOC113546475 |
| TU383446 | other | downstream | 274458 | 20195294 ~ 20195672 (-) | True | G323726 |
| TU383651 | other | upstream | 239680 | 20710697 ~ 20713991 (-) | False | sh3glb1b |
| TU383689 | other | upstream | 357009 | 20828026 ~ 20830104 (-) | True | G323902 |
| TU383704 | other | upstream | 490409 | 20961426 ~ 20969169 (-) | False | LOC113524960 |
| TU383705 | other | upstream | 490556 | 20961573 ~ 20976337 (-) | False | LOC113524960 |
| TU383785 | other | upstream | 581190 | 21052207 ~ 21097709 (-) | True | G323963 |
