Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034314772.1 |
| length | 1180 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 7 |
| gene id | plpp2a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 14671272 ~ 14705998 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU379728 | lncRNA | downstream | 11329 | 14571684 ~ 14659943 (-) | True | G320640 |
| TU379721 | lncRNA | downstream | 39101 | 14627785 ~ 14632171 (-) | True | G320635 |
| TU379329 | lncRNA | downstream | 220249 | 14361947 ~ 14451023 (-) | True | G320317 |
| TU379346 | lncRNA | downstream | 275359 | 14391988 ~ 14395913 (-) | True | G320332 |
| TU379304 | lncRNA | downstream | 352947 | 14318057 ~ 14318325 (-) | True | G320294 |
| TU379867 | lncRNA | upstream | 358128 | 15064126 ~ 15065780 (-) | True | G320767 |
| XR_003403412.2 | lncRNA | upstream | 389679 | 15095677 ~ 15104463 (-) | True | LOC113533367 |
| XR_003403411.2 | lncRNA | upstream | 389679 | 15095677 ~ 15104460 (-) | False | LOC113533367 |
| TU379941 | lncRNA | upstream | 523605 | 15229603 ~ 15230010 (-) | False | LOC113533479 |
| TU379997 | lncRNA | upstream | 575437 | 15281435 ~ 15281638 (-) | True | G320864 |
| XM_026925763.2 | mRNA | downstream | 242179 | 14408452 ~ 14429093 (-) | True | creb3l3b |
| XM_026925764.2 | mRNA | downstream | 266449 | 14401929 ~ 14404823 (-) | True | rxfp3.2a |
| XM_026925666.2 | mRNA | downstream | 334689 | 14142203 ~ 14336583 (-) | True | LOC113533496 |
| XM_026925900.2 | mRNA | downstream | 740134 | 13909865 ~ 13931138 (-) | True | acss2l |
| XM_026925218.2 | mRNA | downstream | 851811 | 13807775 ~ 13819461 (-) | True | napgb |
| XM_026925099.2 | mRNA | upstream | 3124 | 14709122 ~ 14725998 (-) | False | LOC113533171 |
| XM_026925098.2 | mRNA | upstream | 3124 | 14709122 ~ 14725998 (-) | False | LOC113533171 |
| XM_034314577.1 | mRNA | upstream | 3124 | 14709122 ~ 14725998 (-) | False | LOC113533171 |
| XM_034314576.1 | mRNA | upstream | 3124 | 14709122 ~ 14725998 (-) | True | LOC113533171 |
| XM_034314868.1 | mRNA | upstream | 25736 | 14731734 ~ 14745469 (-) | True | theg |
| trnaw-cca_17 | other | downstream | 3122833 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU376553 | other | downstream | 4143022 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 5698060 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 5717162 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 5785563 | 8883649 ~ 8885709 (-) | True | G317176 |
| TU379789 | other | upstream | 25914 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 521474 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 981260 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 981260 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
| TU380669 | other | upstream | 1651576 | 16357574 ~ 16367004 (-) | True | G321462 |
