Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026925617.2 |
| length | 1113 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 1 |
| gene id | LOC113533462 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 10994750 ~ 10995862 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU376853 | lncRNA | downstream | 73188 | 10847475 ~ 10921562 (-) | False | G318202 |
| TU376854 | lncRNA | downstream | 103195 | 10845723 ~ 10891555 (-) | False | G318202 |
| TU376851 | lncRNA | downstream | 117455 | 10845723 ~ 10877295 (-) | False | G318202 |
| TU376850 | lncRNA | downstream | 146967 | 10845723 ~ 10847783 (-) | False | G318202 |
| TU376961 | lncRNA | upstream | 11290 | 11007152 ~ 11009170 (-) | True | G318293 |
| TU377193 | lncRNA | upstream | 191335 | 11187197 ~ 11187400 (-) | True | G318479 |
| XR_003403404.2 | lncRNA | upstream | 399019 | 11394881 ~ 11411164 (-) | True | LOC113533221 |
| TU377280 | lncRNA | upstream | 404803 | 11400665 ~ 11401502 (-) | True | G318552 |
| XR_004580316.1 | lncRNA | upstream | 408686 | 11404548 ~ 11411161 (-) | False | LOC113533221 |
| XM_034314751.1 | mRNA | downstream | 7102 | 10959899 ~ 10987648 (-) | True | klhl24a |
| XM_026925369.2 | mRNA | downstream | 42117 | 10899265 ~ 10952633 (-) | True | yeats2 |
| XM_034314759.1 | mRNA | downstream | 42809 | 10899265 ~ 10951941 (-) | False | yeats2 |
| XM_026925055.2 | mRNA | downstream | 164580 | 10735154 ~ 10830170 (-) | True | ece2a |
| XM_026925400.2 | mRNA | downstream | 283109 | 10704461 ~ 10711641 (-) | True | alg3 |
| XM_026925619.2 | mRNA | upstream | 1277 | 10997139 ~ 11001553 (-) | True | LOC113533463 |
| XM_026925597.2 | mRNA | upstream | 6118 | 11001980 ~ 11010241 (-) | True | mterf4 |
| XM_026925135.2 | mRNA | upstream | 14484 | 11010346 ~ 11029490 (-) | False | pask |
| XM_026925134.2 | mRNA | upstream | 14484 | 11010346 ~ 11029490 (-) | True | pask |
| XM_026925508.2 | mRNA | upstream | 40052 | 11035914 ~ 11091587 (-) | True | kcnab1b |
| TU376553 | other | downstream | 466500 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 2021538 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 2040640 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 2109041 | 8883649 ~ 8885709 (-) | True | G317176 |
| XR_003404406.2 | other | downstream | 2506121 | 8477223 ~ 8488629 (-) | False | vcpip1 |
| trnaw-cca_17 | other | upstream | 552506 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU379789 | other | upstream | 3736050 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 4231610 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 4691396 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 4691396 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
