Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026925675.2 |
| length | 1355 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 4 |
| gene id | hes6 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 11467120 ~ 11468787 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0001756 | somitogenesis | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0017053 | transcription repressor complex | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403404.2 | lncRNA | downstream | 55956 | 11394881 ~ 11411164 (-) | True | LOC113533221 |
| XR_004580316.1 | lncRNA | downstream | 55959 | 11404548 ~ 11411161 (-) | False | LOC113533221 |
| TU377282 | lncRNA | downstream | 56888 | 11405374 ~ 11410232 (-) | False | LOC113533221 |
| TU377280 | lncRNA | downstream | 65618 | 11400665 ~ 11401502 (-) | True | G318552 |
| TU377193 | lncRNA | downstream | 279720 | 11187197 ~ 11187400 (-) | True | G318479 |
| TU377417 | lncRNA | upstream | 151089 | 11619876 ~ 11705877 (-) | False | wu:fb63a08 |
| XR_004580347.1 | lncRNA | upstream | 160783 | 11629570 ~ 11631921 (-) | True | LOC117599995 |
| XR_004580348.1 | lncRNA | upstream | 160783 | 11629570 ~ 11631912 (-) | False | LOC117599995 |
| TU377432 | lncRNA | upstream | 220702 | 11689489 ~ 11693334 (-) | True | G318639 |
| TU377454 | lncRNA | upstream | 332860 | 11801647 ~ 11801862 (-) | True | G318660 |
| XM_034314683.1 | mRNA | downstream | 141874 | 11287176 ~ 11325246 (-) | False | gbp2 |
| XM_034314682.1 | mRNA | downstream | 158966 | 11287176 ~ 11308154 (-) | False | gbp2 |
| XM_034314681.1 | mRNA | downstream | 158966 | 11287176 ~ 11308154 (-) | True | gbp2 |
| XM_034314680.1 | mRNA | downstream | 160899 | 11287176 ~ 11306221 (-) | False | gbp2 |
| XM_034314679.1 | mRNA | downstream | 161019 | 11287176 ~ 11306101 (-) | False | gbp2 |
| XM_026925725.2 | mRNA | upstream | 23807 | 11492594 ~ 11496391 (-) | True | LOC113533529 |
| XM_026925340.2 | mRNA | upstream | 80996 | 11549783 ~ 11572390 (-) | True | acsl3b |
| XM_034297713.1 | mRNA | upstream | 216048 | 11684835 ~ 11705835 (-) | False | wu:fb63a08 |
| XM_034297716.1 | mRNA | upstream | 216048 | 11684835 ~ 11705835 (-) | False | wu:fb63a08 |
| XM_026925718.2 | mRNA | upstream | 216048 | 11684835 ~ 11705835 (-) | False | wu:fb63a08 |
| TU376553 | other | downstream | 938870 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 2493908 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 2513010 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 2581411 | 8883649 ~ 8885709 (-) | True | G317176 |
| XR_003404406.2 | other | downstream | 2978491 | 8477223 ~ 8488629 (-) | False | vcpip1 |
| trnaw-cca_17 | other | upstream | 79581 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU379789 | other | upstream | 3263125 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 3758685 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 4218471 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 4218471 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
