Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940904.2 |
| length | 853 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | LOC113543002 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 8504015 ~ 8505230 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0032400 | melanosome localization | biological_process |
| GO:0035902 | response to immobilization stress | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU375146 | lncRNA | upstream | 126922 | 8376785 ~ 8377093 (+) | True | G316756 |
| TU375144 | lncRNA | upstream | 170484 | 8332424 ~ 8333531 (+) | True | G316754 |
| TU375142 | lncRNA | upstream | 172229 | 8331506 ~ 8331786 (+) | True | G316752 |
| XR_004580332.1 | lncRNA | upstream | 242303 | 8260724 ~ 8261712 (+) | False | LOC113543009 |
| TU375132 | lncRNA | upstream | 242307 | 8259258 ~ 8261708 (+) | True | LOC113543009 |
| TU375442 | lncRNA | downstream | 82765 | 8587995 ~ 8588211 (+) | True | G317008 |
| TU375461 | lncRNA | downstream | 156056 | 8661286 ~ 8661776 (+) | True | G317027 |
| TU375465 | lncRNA | downstream | 184205 | 8689435 ~ 8691471 (+) | True | G317031 |
| TU375493 | lncRNA | downstream | 221111 | 8726341 ~ 8730818 (+) | True | G317045 |
| TU375589 | lncRNA | downstream | 288484 | 8793714 ~ 8793944 (+) | True | G317113 |
| XM_026941421.2 | mRNA | upstream | 27043 | 8467382 ~ 8476972 (+) | True | adhfe1 |
| XM_026941189.2 | mRNA | upstream | 41888 | 8437381 ~ 8462127 (+) | True | slco5a1a |
| XM_034314780.1 | mRNA | upstream | 41888 | 8439182 ~ 8462127 (+) | False | slco5a1a |
| XM_026941191.2 | mRNA | upstream | 71768 | 8427819 ~ 8432247 (+) | False | lactb2 |
| XM_026941192.2 | mRNA | upstream | 71768 | 8428127 ~ 8432247 (+) | True | lactb2 |
| XM_034314640.1 | mRNA | downstream | 47017 | 8552247 ~ 8585499 (+) | False | LOC113543000 |
| XM_034314639.1 | mRNA | downstream | 47073 | 8552303 ~ 8585499 (+) | False | LOC113543000 |
| XM_034314636.1 | mRNA | downstream | 47104 | 8552334 ~ 8585499 (+) | False | LOC113543000 |
| XM_034314641.1 | mRNA | downstream | 47104 | 8552334 ~ 8585499 (+) | False | LOC113543000 |
| XM_034314638.1 | mRNA | downstream | 47254 | 8552484 ~ 8585499 (+) | False | LOC113543000 |
| TU375135 | other | upstream | 234817 | 8268709 ~ 8269198 (+) | True | G316745 |
| TU375134 | other | upstream | 239954 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU374748 | other | upstream | 808096 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU374286 | other | upstream | 1368514 | 7133459 ~ 7135501 (+) | True | G316001 |
| XR_004580329.1 | other | upstream | 1559407 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU375607 | other | downstream | 306727 | 8811957 ~ 8812820 (+) | False | LOC117599964 |
| TU375892 | other | downstream | 907093 | 9412323 ~ 9415164 (+) | True | G317390 |
| TU376185 | other | downstream | 1454099 | 9959329 ~ 9977901 (+) | False | pip4p1a |
| trnar-ucu_12 | other | downstream | 1682521 | 10187751 ~ 10187824 (+) | True | trnar-ucu_12 |
| XR_004580322.1 | other | downstream | 2031201 | 10536431 ~ 10562994 (+) | False | capn10 |
