Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940992.2 |
| length | 1188 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | tagln |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 3962755 ~ 3968351 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007517 | muscle organ development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580328.1 | lncRNA | upstream | 67070 | 3888027 ~ 3895685 (+) | True | LOC117599982 |
| TU371944 | lncRNA | upstream | 116660 | 3845857 ~ 3846095 (+) | True | G313990 |
| TU371896 | lncRNA | upstream | 142846 | 3773070 ~ 3819909 (+) | True | G313949 |
| TU371923 | lncRNA | upstream | 154065 | 3807148 ~ 3808690 (+) | True | G313975 |
| TU371775 | lncRNA | upstream | 438237 | 3524309 ~ 3524518 (+) | True | G313853 |
| TU372207 | lncRNA | downstream | 28151 | 3996502 ~ 4000314 (+) | True | G314222 |
| TU372364 | lncRNA | downstream | 321903 | 4290254 ~ 4293729 (+) | True | G314362 |
| TU372366 | lncRNA | downstream | 326514 | 4294865 ~ 4295074 (+) | True | G314364 |
| TU372412 | lncRNA | downstream | 411286 | 4379637 ~ 4384865 (+) | True | G314402 |
| TU372416 | lncRNA | downstream | 549250 | 4517601 ~ 4527820 (+) | True | G314404 |
| XM_026941277.2 | mRNA | upstream | 145901 | 3813253 ~ 3816854 (+) | True | pmvk |
| XM_026941244.2 | mRNA | upstream | 300068 | 3647747 ~ 3662687 (+) | True | nt5c3a |
| XM_026941245.2 | mRNA | upstream | 300068 | 3656034 ~ 3662687 (+) | False | nt5c3a |
| XM_034314852.1 | mRNA | upstream | 316083 | 3642315 ~ 3646672 (+) | True | LOC113543357 |
| XM_026941367.2 | mRNA | upstream | 439542 | 3502067 ~ 3523213 (+) | True | atg5 |
| XM_034314876.1 | mRNA | downstream | 206442 | 4174793 ~ 4183429 (+) | True | LOC113543359 |
| XM_034314877.1 | mRNA | downstream | 211635 | 4179986 ~ 4183429 (+) | False | LOC113543359 |
| XM_026941365.2 | mRNA | downstream | 257147 | 4225498 ~ 4238706 (+) | True | igsf10 |
| XM_026941339.2 | mRNA | downstream | 283519 | 4251870 ~ 4256834 (+) | False | p2ry12 |
| XM_026941338.2 | mRNA | downstream | 284397 | 4252748 ~ 4256834 (+) | True | p2ry12 |
| trnap-ugg_21 | other | upstream | 15749 | 3946935 ~ 3947006 (+) | True | trnap-ugg_21 |
| trnas-aga_16 | other | upstream | 334642 | 3628032 ~ 3628113 (+) | True | trnas-aga_16 |
| trnas-aga_14 | other | upstream | 336725 | 3625960 ~ 3626030 (+) | True | trnas-aga_14 |
| trnas-aga_13 | other | upstream | 337258 | 3625416 ~ 3625497 (+) | True | trnas-aga_13 |
| trnat-agu_12 | other | upstream | 1073367 | 2889315 ~ 2889388 (+) | True | trnat-agu_12 |
| XR_004580320.1 | other | downstream | 624089 | 4592440 ~ 4692816 (+) | False | LOC113543063 |
| TU372694 | other | downstream | 968697 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
| TU372695 | other | downstream | 968697 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
| TU372696 | other | downstream | 968697 | 4937048 ~ 4958120 (+) | False | LOC113543089 |
| TU372849 | other | downstream | 1119750 | 5088101 ~ 5091097 (+) | False | sptssb |
