Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026941191.2 |
| length | 1344 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | lactb2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 8427819 ~ 8432247 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU375146 | lncRNA | upstream | 50726 | 8376785 ~ 8377093 (+) | True | G316756 |
| TU375144 | lncRNA | upstream | 94288 | 8332424 ~ 8333531 (+) | True | G316754 |
| TU375142 | lncRNA | upstream | 96033 | 8331506 ~ 8331786 (+) | True | G316752 |
| XR_004580332.1 | lncRNA | upstream | 166107 | 8260724 ~ 8261712 (+) | False | LOC113543009 |
| TU375132 | lncRNA | upstream | 166111 | 8259258 ~ 8261708 (+) | True | LOC113543009 |
| TU375442 | lncRNA | downstream | 155748 | 8587995 ~ 8588211 (+) | True | G317008 |
| TU375461 | lncRNA | downstream | 229039 | 8661286 ~ 8661776 (+) | True | G317027 |
| TU375465 | lncRNA | downstream | 257188 | 8689435 ~ 8691471 (+) | True | G317031 |
| TU375493 | lncRNA | downstream | 294094 | 8726341 ~ 8730818 (+) | True | G317045 |
| TU375589 | lncRNA | downstream | 361467 | 8793714 ~ 8793944 (+) | True | G317113 |
| XM_026941385.2 | mRNA | upstream | 5574 | 8386512 ~ 8422245 (+) | False | slco5a1b |
| XM_026941384.2 | mRNA | upstream | 5574 | 8386513 ~ 8422245 (+) | True | slco5a1b |
| XM_026941045.2 | mRNA | upstream | 48353 | 8334824 ~ 8379466 (+) | True | esyt2a |
| XM_026941046.2 | mRNA | upstream | 48353 | 8334827 ~ 8379466 (+) | False | esyt2a |
| XM_034314688.1 | mRNA | upstream | 48353 | 8334828 ~ 8379466 (+) | False | esyt2a |
| XM_026941189.2 | mRNA | downstream | 5134 | 8437381 ~ 8462127 (+) | True | slco5a1a |
| XM_034314780.1 | mRNA | downstream | 6935 | 8439182 ~ 8462127 (+) | False | slco5a1a |
| XM_026941421.2 | mRNA | downstream | 35135 | 8467382 ~ 8476972 (+) | True | adhfe1 |
| XM_026940904.2 | mRNA | downstream | 71768 | 8504015 ~ 8505230 (+) | True | LOC113543002 |
| XM_034314640.1 | mRNA | downstream | 120000 | 8552247 ~ 8585499 (+) | False | LOC113543000 |
| TU375135 | other | upstream | 158621 | 8268709 ~ 8269198 (+) | True | G316745 |
| TU375134 | other | upstream | 163758 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU374748 | other | upstream | 731900 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU374286 | other | upstream | 1292318 | 7133459 ~ 7135501 (+) | True | G316001 |
| XR_004580329.1 | other | upstream | 1483211 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU375607 | other | downstream | 379710 | 8811957 ~ 8812820 (+) | False | LOC117599964 |
| TU375892 | other | downstream | 980076 | 9412323 ~ 9415164 (+) | True | G317390 |
| TU376185 | other | downstream | 1527082 | 9959329 ~ 9977901 (+) | False | pip4p1a |
| trnar-ucu_12 | other | downstream | 1755504 | 10187751 ~ 10187824 (+) | True | trnar-ucu_12 |
| XR_004580322.1 | other | downstream | 2104184 | 10536431 ~ 10562994 (+) | False | capn10 |
