Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034297786.1 |
| length | 1096 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 10 |
| gene id | ech1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 6961943 ~ 6969948 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0003824 | catalytic activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU374158 | lncRNA | upstream | 26766 | 6934949 ~ 6935177 (+) | True | G315901 |
| TU374147 | lncRNA | upstream | 46402 | 6914261 ~ 6915541 (+) | True | G315894 |
| TU374135 | lncRNA | upstream | 67326 | 6894337 ~ 6894617 (+) | True | G315886 |
| TU374111 | lncRNA | upstream | 235255 | 6726474 ~ 6726688 (+) | True | G315862 |
| TU374042 | lncRNA | upstream | 307880 | 6646145 ~ 6654063 (+) | True | G315811 |
| TU374244 | lncRNA | downstream | 64034 | 7033565 ~ 7033806 (+) | True | G315968 |
| TU374285 | lncRNA | downstream | 158160 | 7127691 ~ 7129877 (+) | True | G316000 |
| TU374593 | lncRNA | downstream | 456930 | 7426461 ~ 7433424 (+) | True | G316288 |
| TU374628 | lncRNA | downstream | 535548 | 7505079 ~ 7505404 (+) | True | G316317 |
| TU374657 | lncRNA | downstream | 595555 | 7565086 ~ 7568068 (+) | True | G316339 |
| XM_026941228.2 | mRNA | upstream | 3054 | 6945526 ~ 6958889 (+) | True | hnrnpl2 |
| XM_026941229.2 | mRNA | upstream | 3054 | 6945526 ~ 6958889 (+) | False | hnrnpl2 |
| XM_026941194.2 | mRNA | upstream | 16953 | 6937343 ~ 6944990 (+) | False | LOC113543138 |
| XM_034314795.1 | mRNA | upstream | 16953 | 6937582 ~ 6944990 (+) | False | LOC113543138 |
| XM_034314796.1 | mRNA | upstream | 19124 | 6937340 ~ 6942819 (+) | False | LOC113543138 |
| XM_026941503.2 | mRNA | downstream | 2021 | 6971552 ~ 6982646 (+) | True | LOC113543373 |
| XM_026940849.2 | mRNA | downstream | 27953 | 6997484 ~ 7008738 (+) | True | meis3 |
| XM_034314805.1 | mRNA | downstream | 175870 | 7145401 ~ 7156229 (+) | False | atm |
| XM_034314802.1 | mRNA | downstream | 175872 | 7145403 ~ 7203200 (+) | True | atm |
| XM_034314803.1 | mRNA | downstream | 186179 | 7155710 ~ 7203200 (+) | False | atm |
| XR_004580329.1 | other | upstream | 17335 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU373737 | other | upstream | 734703 | 6226717 ~ 6227240 (+) | True | G315581 |
| TU373444 | other | upstream | 1065113 | 5894504 ~ 5896830 (+) | False | shox2 |
| trnat-agu_13 | other | upstream | 1742325 | 5219545 ~ 5219618 (+) | True | trnat-agu_13 |
| TU372849 | other | upstream | 1870846 | 5088101 ~ 5091097 (+) | False | sptssb |
| TU374286 | other | downstream | 163928 | 7133459 ~ 7135501 (+) | True | G316001 |
| TU374748 | other | downstream | 726003 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU375134 | other | downstream | 1293808 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU375135 | other | downstream | 1299178 | 8268709 ~ 8269198 (+) | True | G316745 |
| TU375607 | other | downstream | 1842426 | 8811957 ~ 8812820 (+) | False | LOC117599964 |
