Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026946146.2 |
| length | 1266 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 7 |
| gene id | mffb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 18747527 ~ 18754060 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0090314 | positive regulation of protein targeting to membrane | biological_process |
| GO:0090141 | positive regulation of mitochondrial fission | biological_process |
| GO:0005777 | peroxisome | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0042803 | protein homodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU382137 | lncRNA | upstream | 27088 | 18715395 ~ 18720439 (+) | True | G322696 |
| TU381857 | lncRNA | upstream | 307661 | 18439167 ~ 18439866 (+) | True | G322462 |
| TU381841 | lncRNA | upstream | 314825 | 18432326 ~ 18432702 (+) | True | G322446 |
| TU381819 | lncRNA | upstream | 373644 | 18370727 ~ 18373883 (+) | True | G322429 |
| TU381788 | lncRNA | upstream | 404037 | 18338329 ~ 18343490 (+) | True | G322405 |
| TU382184 | lncRNA | downstream | 11132 | 18765192 ~ 18765602 (+) | True | G322738 |
| TU382190 | lncRNA | downstream | 57045 | 18811105 ~ 18811652 (+) | False | G322744 |
| TU382191 | lncRNA | downstream | 57124 | 18811184 ~ 18812335 (+) | True | G322744 |
| TU382193 | lncRNA | downstream | 58443 | 18812503 ~ 18812848 (+) | True | G322746 |
| TU382194 | lncRNA | downstream | 60554 | 18814614 ~ 18814817 (+) | True | G322747 |
| XM_034314502.1 | mRNA | upstream | 30975 | 18692192 ~ 18716552 (+) | True | LOC113546386 |
| XM_034314503.1 | mRNA | upstream | 30975 | 18692192 ~ 18716552 (+) | False | LOC113546386 |
| XM_026946208.2 | mRNA | upstream | 30975 | 18692192 ~ 18716552 (+) | False | LOC113546386 |
| XM_026946207.2 | mRNA | upstream | 30975 | 18692206 ~ 18716552 (+) | False | LOC113546386 |
| XM_026946209.2 | mRNA | upstream | 30975 | 18703174 ~ 18716552 (+) | False | LOC113546386 |
| XM_026946325.2 | mRNA | downstream | 2669 | 18756729 ~ 18763488 (+) | True | bpnt2 |
| XM_026946330.2 | mRNA | downstream | 37285 | 18791345 ~ 18797861 (+) | True | penka |
| XM_026946133.2 | mRNA | downstream | 45143 | 18799203 ~ 18810210 (+) | True | sdr16c5a |
| XM_026946110.2 | mRNA | downstream | 61949 | 18816009 ~ 18866798 (+) | False | slc44a5a |
| XM_034314552.1 | mRNA | downstream | 100502 | 18854562 ~ 18866798 (+) | False | slc44a5a |
| TU381842 | other | upstream | 324896 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU381774 | other | upstream | 520294 | 18226562 ~ 18227233 (+) | False | si:ch211-162e15.3 |
| TU381775 | other | upstream | 520391 | 18226562 ~ 18227136 (+) | False | si:ch211-162e15.3 |
| XR_003404718.2 | other | upstream | 1115919 | 17570649 ~ 17631608 (+) | False | egfra |
| XR_004580278.1 | other | upstream | 1263850 | 17478834 ~ 17483677 (+) | False | fuz |
| XR_004580282.1 | other | downstream | 61949 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU383181 | other | downstream | 1684642 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580310.1 | other | downstream | 1883524 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| trnap-ugg_22 | other | downstream | 2161344 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| TU383298 | other | downstream | 2267129 | 21021189 ~ 21136847 (+) | True | G323615 |
