Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00008053 |
| length | 814 |
| lncRNA type | retained_intron |
| GC content | 0.33 |
| exon number | 2 |
| gene id | XLOC_004204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 30355442 ~ 30364847 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0033306 | phytol metabolic process | biological_process |
| GO:0005777 | peroxisome | cellular_component |
| GO:0019166 | trans-2-enoyl-CoA reductase (NADPH) activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050417-232 | Predicted to enable trans-2-enoyl-CoA reductase (NADPH) activity. Predicted to be involved in phytol metabolic process. Predicted to be active in peroxisome. Orthologous to human PECR (peroxisomal trans-2-enoyl-CoA reductase). |
| ensembl_id | ENSDART00000154610 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008040 | lncRNA | downstream | 399727 | 29961114 ~ 29961901 (-) | True | XLOC_004198 |
| TCONS_00008036 | lncRNA | downstream | 440626 | 29918315 ~ 29921002 (-) | False | XLOC_004197 |
| TCONS_00008027 | lncRNA | downstream | 599617 | 29760108 ~ 29762011 (-) | True | XLOC_004194 |
| TCONS_00008025 | lncRNA | downstream | 624381 | 29734578 ~ 29737247 (-) | True | XLOC_004193 |
| TCONS_00008023 | lncRNA | downstream | 703758 | 29652690 ~ 29657870 (-) | True | XLOC_004191 |
| TCONS_00008812 | lncRNA | upstream | 835414 | 31200219 ~ 31202839 (-) | True | XLOC_004211 |
| TCONS_00008813 | lncRNA | upstream | 840120 | 31204925 ~ 31211308 (-) | True | XLOC_004212 |
| TCONS_00008814 | lncRNA | upstream | 1785413 | 32150218 ~ 32157526 (-) | False | XLOC_004216 |
| TCONS_00008815 | lncRNA | upstream | 1790149 | 32154954 ~ 32156318 (-) | True | XLOC_004216 |
| TCONS_00008816 | lncRNA | upstream | 2001107 | 32365912 ~ 32391388 (-) | True | XLOC_004217 |
| TCONS_00008050 | mRNA | downstream | 9295 | 30348273 ~ 30352333 (-) | True | XLOC_004203 |
| TCONS_00008049 | mRNA | downstream | 20197 | 30332959 ~ 30341431 (-) | True | XLOC_004202 |
| TCONS_00008046 | mRNA | downstream | 203019 | 30107447 ~ 30158609 (-) | False | XLOC_004201 |
| TCONS_00008045 | mRNA | downstream | 203405 | 30106182 ~ 30158223 (-) | False | XLOC_004201 |
| TCONS_00008047 | mRNA | downstream | 203437 | 30151238 ~ 30158191 (-) | False | XLOC_004201 |
| TCONS_00008054 | mRNA | upstream | 863 | 30365668 ~ 30508843 (-) | False | XLOC_004205 |
| TCONS_00008055 | mRNA | upstream | 2833 | 30367638 ~ 30508851 (-) | False | XLOC_004205 |
| TCONS_00008057 | mRNA | upstream | 171138 | 30535943 ~ 30611814 (-) | False | XLOC_004206 |
| TCONS_00008058 | mRNA | upstream | 171740 | 30536545 ~ 30601401 (-) | False | XLOC_004206 |
| TCONS_00008059 | mRNA | upstream | 171740 | 30536545 ~ 30601494 (-) | False | XLOC_004206 |
| TCONS_00008048 | other | downstream | 205793 | 30153818 ~ 30155835 (-) | True | XLOC_004201 |
| TCONS_00008043 | other | downstream | 260371 | 30101142 ~ 30101257 (-) | True | XLOC_004200 |
| TCONS_00008039 | other | downstream | 414988 | 29944930 ~ 29946640 (-) | True | XLOC_004197 |
| TCONS_00008033 | other | downstream | 452003 | 29896372 ~ 29909625 (-) | False | XLOC_004196 |
| TCONS_00008030 | other | downstream | 545426 | 29809697 ~ 29816202 (-) | False | XLOC_004195 |
| TCONS_00008056 | other | upstream | 59421 | 30424226 ~ 30508791 (-) | True | XLOC_004205 |
| TCONS_00008067 | other | upstream | 805544 | 31170349 ~ 31172254 (-) | True | XLOC_004210 |
| TCONS_00008075 | other | upstream | 2366360 | 32731165 ~ 32737593 (-) | True | XLOC_004221 |
| TCONS_00008078 | other | upstream | 3006446 | 33371251 ~ 33371367 (-) | True | XLOC_004227 |
| TCONS_00008088 | other | upstream | 3601353 | 33966158 ~ 33966272 (-) | True | XLOC_004234 |
