Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026946360.2 |
| length | 1107 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 8 |
| gene id | rpl5a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 19073707 ~ 19077866 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K02932 | RP-L5e, RPL5; large subunit ribosomal protein L5e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU382280 | lncRNA | upstream | 79084 | 18993758 ~ 18994623 (+) | True | G322817 |
| TU382249 | lncRNA | upstream | 88625 | 18964741 ~ 18985082 (+) | False | ssbp3a |
| TU382250 | lncRNA | upstream | 88901 | 18944698 ~ 18984806 (+) | False | ssbp3a |
| TU382261 | lncRNA | upstream | 114388 | 18959083 ~ 18959319 (+) | True | G322802 |
| TU382194 | lncRNA | upstream | 258890 | 18814614 ~ 18814817 (+) | True | G322747 |
| TU382465 | lncRNA | downstream | 29520 | 19107386 ~ 19109334 (+) | True | G322957 |
| TU382490 | lncRNA | downstream | 126812 | 19204678 ~ 19218238 (+) | False | gng12a |
| TU382511 | lncRNA | downstream | 236013 | 19313879 ~ 19316048 (+) | False | LOC113546339 |
| TU382639 | lncRNA | downstream | 356364 | 19434230 ~ 19438075 (+) | True | G323104 |
| TU382711 | lncRNA | downstream | 434858 | 19512724 ~ 19523033 (+) | False | G323168 |
| XM_034314834.1 | mRNA | upstream | 31077 | 19027881 ~ 19042630 (+) | True | rpap2 |
| XM_034314836.1 | mRNA | upstream | 31077 | 19027881 ~ 19042630 (+) | False | rpap2 |
| XM_034314835.1 | mRNA | upstream | 31077 | 19027883 ~ 19042630 (+) | False | rpap2 |
| XM_026946319.2 | mRNA | upstream | 59514 | 19006527 ~ 19014193 (+) | True | cdc7 |
| XM_034297785.1 | mRNA | upstream | 59514 | 19006527 ~ 19014193 (+) | False | cdc7 |
| XM_034314913.1 | mRNA | downstream | 17056 | 19094922 ~ 19106149 (+) | True | mtf2 |
| XM_026946323.2 | mRNA | downstream | 32422 | 19110288 ~ 19136781 (+) | True | ccdc18 |
| XM_026946173.2 | mRNA | downstream | 65742 | 19143608 ~ 19159205 (+) | False | scinlb |
| XM_026946174.2 | mRNA | downstream | 68768 | 19146634 ~ 19160143 (+) | True | scinlb |
| XM_026946336.2 | mRNA | downstream | 85809 | 19163675 ~ 19187632 (+) | True | wls |
| XR_004580282.1 | other | upstream | 202347 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU381842 | other | upstream | 651076 | 18415817 ~ 18422631 (+) | False | pex5lb |
| TU381774 | other | upstream | 846474 | 18226562 ~ 18227233 (+) | False | si:ch211-162e15.3 |
| TU381775 | other | upstream | 846571 | 18226562 ~ 18227136 (+) | False | si:ch211-162e15.3 |
| XR_003404718.2 | other | upstream | 1442099 | 17570649 ~ 17631608 (+) | False | egfra |
| TU383181 | other | downstream | 1360836 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580310.1 | other | downstream | 1559718 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| trnap-ugg_22 | other | downstream | 1837538 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| TU383298 | other | downstream | 1943323 | 21021189 ~ 21136847 (+) | True | G323615 |
| TU383295 | other | downstream | 2057253 | 21135119 ~ 21136847 (+) | False | G323615 |
