Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034297704.1 |
| length | 432 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | LOC113533464 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 11225802 ~ 11230391 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU377193 | lncRNA | downstream | 38402 | 11187197 ~ 11187400 (-) | True | G318479 |
| TU376961 | lncRNA | downstream | 216632 | 11007152 ~ 11009170 (-) | True | G318293 |
| TU376853 | lncRNA | downstream | 304240 | 10847475 ~ 10921562 (-) | False | G318202 |
| TU376854 | lncRNA | downstream | 334247 | 10845723 ~ 10891555 (-) | False | G318202 |
| TU376851 | lncRNA | downstream | 348507 | 10845723 ~ 10877295 (-) | False | G318202 |
| XR_003403404.2 | lncRNA | upstream | 164490 | 11394881 ~ 11411164 (-) | True | LOC113533221 |
| TU377280 | lncRNA | upstream | 170274 | 11400665 ~ 11401502 (-) | True | G318552 |
| XR_004580316.1 | lncRNA | upstream | 174157 | 11404548 ~ 11411161 (-) | False | LOC113533221 |
| TU377282 | lncRNA | upstream | 174983 | 11405374 ~ 11410232 (-) | False | LOC113533221 |
| TU377417 | lncRNA | upstream | 389485 | 11619876 ~ 11705877 (-) | False | wu:fb63a08 |
| XM_026925431.2 | mRNA | downstream | 55410 | 11108408 ~ 11170392 (-) | False | mbnl1 |
| XM_034297782.1 | mRNA | downstream | 55456 | 11108408 ~ 11170346 (-) | False | mbnl1 |
| XM_026925439.2 | mRNA | downstream | 68471 | 11108408 ~ 11157331 (-) | False | mbnl1 |
| XM_026925435.2 | mRNA | downstream | 68471 | 11108408 ~ 11157331 (-) | False | mbnl1 |
| XM_026925434.2 | mRNA | downstream | 68471 | 11108408 ~ 11157331 (-) | False | mbnl1 |
| XM_026925127.2 | mRNA | upstream | 24039 | 11254430 ~ 11257433 (-) | True | scg2b |
| XM_026925128.2 | mRNA | upstream | 24039 | 11254430 ~ 11256894 (-) | False | scg2b |
| XM_034314683.1 | mRNA | upstream | 56785 | 11287176 ~ 11325246 (-) | False | gbp2 |
| XM_034314682.1 | mRNA | upstream | 56785 | 11287176 ~ 11308154 (-) | False | gbp2 |
| XM_034314681.1 | mRNA | upstream | 56785 | 11287176 ~ 11308154 (-) | True | gbp2 |
| TU376553 | other | downstream | 697552 | 10527282 ~ 10528250 (-) | False | ccl20a.3 |
| TU375761 | other | downstream | 2252590 | 8969781 ~ 8973212 (-) | False | LOC113542985 |
| XR_004580311.1 | other | downstream | 2271692 | 8904014 ~ 8954110 (-) | False | pitrm1 |
| TU375659 | other | downstream | 2340093 | 8883649 ~ 8885709 (-) | True | G317176 |
| XR_003404406.2 | other | downstream | 2737173 | 8477223 ~ 8488629 (-) | False | vcpip1 |
| trnaw-cca_17 | other | upstream | 317977 | 11548368 ~ 11548439 (-) | True | trnaw-cca_17 |
| TU379789 | other | upstream | 3501521 | 14731912 ~ 14745487 (-) | False | theg |
| TU379938 | other | upstream | 3997081 | 15227472 ~ 15229256 (-) | False | LOC113533479 |
| TU380215 | other | upstream | 4456867 | 15687258 ~ 15717495 (-) | False | LOC113533563 |
| TU380217 | other | upstream | 4456867 | 15687258 ~ 15724356 (-) | False | LOC113533563 |
