Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034314734.1 |
| length | 893 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | LOC117599975 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 16830102 ~ 16845645 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU380813 | lncRNA | upstream | 37664 | 16792128 ~ 16792438 (+) | False | LOC117595733 |
| TU380812 | lncRNA | upstream | 38005 | 16750160 ~ 16792097 (+) | True | G321582 |
| TU380843 | lncRNA | downstream | 47172 | 16892813 ~ 16893024 (+) | True | G321602 |
| TU380963 | lncRNA | downstream | 113104 | 16958745 ~ 16960734 (+) | True | G321704 |
| TU381407 | lncRNA | downstream | 635744 | 17481385 ~ 17482562 (+) | False | fuz |
| TU381408 | lncRNA | downstream | 636272 | 17481913 ~ 17483644 (+) | False | fuz |
| XR_004580280.1 | lncRNA | downstream | 679930 | 17525571 ~ 17537160 (+) | True | LOC117599934 |
| XM_034314735.1 | mRNA | upstream | 5494 | 16820735 ~ 16824608 (+) | True | LOC117599976 |
| XM_034314732.1 | mRNA | upstream | 24839 | 16798786 ~ 16805263 (+) | True | LOC117599974 |
| XM_034297723.1 | mRNA | upstream | 36404 | 16791402 ~ 16793698 (+) | True | LOC117595733 |
| XM_034314727.1 | mRNA | upstream | 56786 | 16762281 ~ 16773316 (+) | True | LOC117599973 |
| XM_034314717.1 | mRNA | downstream | 5844 | 16851485 ~ 16859682 (+) | False | LOC117599970 |
| XM_034297724.1 | mRNA | downstream | 15182 | 16860823 ~ 16868946 (+) | True | LOC117595734 |
| XM_034314719.1 | mRNA | downstream | 28241 | 16873882 ~ 16882758 (+) | True | LOC113546333 |
| XM_034314718.1 | mRNA | downstream | 31032 | 16876673 ~ 16882758 (+) | False | LOC113546333 |
| XM_026946365.2 | mRNA | downstream | 85667 | 16931308 ~ 16937488 (+) | False | them6 |
| trnag-gcc_20 | other | upstream | 643061 | 16186971 ~ 16187041 (+) | True | trnag-gcc_20 |
| trnag-gcc_19 | other | upstream | 644535 | 16185497 ~ 16185567 (+) | True | trnag-gcc_19 |
| trnag-gcc_18 | other | upstream | 645960 | 16184072 ~ 16184142 (+) | True | trnag-gcc_18 |
| TU380434 | other | upstream | 697738 | 16131335 ~ 16132364 (+) | True | G321257 |
| XR_003403417.2 | other | upstream | 710069 | 16112036 ~ 16120033 (+) | False | si:ch211-178n15.1 |
| TU380835 | other | downstream | 5804 | 16851445 ~ 16852424 (+) | False | LOC117599970 |
| XR_004580277.1 | other | downstream | 633193 | 17478834 ~ 17483677 (+) | False | fuz |
| XR_004580278.1 | other | downstream | 633193 | 17478834 ~ 17483677 (+) | False | fuz |
| XR_003404718.2 | other | downstream | 725008 | 17570649 ~ 17631608 (+) | False | egfra |
| TU381774 | other | downstream | 1380921 | 18226562 ~ 18227233 (+) | False | si:ch211-162e15.3 |
