Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026909662.2 |
| length | 815 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 4 |
| gene id | cmc1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 182467 ~ 193845 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383880 | lncRNA | upstream | 31477 | 116967 ~ 150990 (+) | True | G324039 |
| TU383888 | lncRNA | upstream | 43606 | 137101 ~ 138861 (+) | True | G324045 |
| TU383885 | lncRNA | upstream | 61580 | 116414 ~ 120887 (+) | True | G324042 |
| TU383884 | lncRNA | upstream | 89619 | 91952 ~ 92848 (+) | True | G324041 |
| TU383856 | lncRNA | upstream | 123915 | 57345 ~ 58552 (+) | True | G324026 |
| TU383904 | lncRNA | downstream | 25206 | 218832 ~ 219099 (+) | True | G324060 |
| XR_003402450.2 | lncRNA | downstream | 39988 | 233614 ~ 234579 (+) | False | LOC113523709 |
| TU383905 | lncRNA | downstream | 40033 | 233659 ~ 234831 (+) | True | LOC113523709 |
| TU383912 | lncRNA | downstream | 46744 | 240370 ~ 327939 (+) | False | tbx20 |
| TU383927 | lncRNA | downstream | 108247 | 301873 ~ 303209 (+) | False | tbx20 |
| XM_026912119.2 | mRNA | upstream | 67321 | 108218 ~ 115146 (+) | True | ethe1 |
| XM_026912112.2 | mRNA | upstream | 74669 | 98037 ~ 107798 (+) | False | LOC113525556 |
| XM_026912116.2 | mRNA | upstream | 74669 | 98037 ~ 107798 (+) | False | LOC113525556 |
| XM_026912114.2 | mRNA | upstream | 74670 | 96799 ~ 107797 (+) | True | LOC113525556 |
| XM_026912113.2 | mRNA | upstream | 74670 | 98037 ~ 107797 (+) | False | LOC113525556 |
| XM_034297886.1 | mRNA | downstream | 28891 | 222517 ~ 231494 (+) | True | zgc:114181 |
| XM_034298133.1 | mRNA | downstream | 108254 | 301880 ~ 321183 (+) | True | tbx20 |
| XM_034298255.1 | mRNA | downstream | 140058 | 333684 ~ 350549 (+) | True | dpy19l1l |
| XM_034297869.1 | mRNA | downstream | 261890 | 455516 ~ 456979 (+) | True | LOC117595771 |
| XM_034297870.1 | mRNA | downstream | 261950 | 455576 ~ 456979 (+) | False | LOC117595771 |
| XR_003402678.2 | other | upstream | 148678 | 25296 ~ 33789 (+) | False | nod1 |
| TU383850 | other | upstream | 159257 | 22297 ~ 23210 (+) | True | G324020 |
| TU383916 | other | downstream | 47571 | 241197 ~ 292588 (+) | True | G324068 |
| TU383926 | other | downstream | 112555 | 306181 ~ 311233 (+) | False | tbx20 |
| TU383913 | other | downstream | 121724 | 315350 ~ 321774 (+) | False | tbx20 |
| TU383914 | other | downstream | 161155 | 354781 ~ 412109 (+) | True | G324067 |
| TU383942 | other | downstream | 244765 | 438391 ~ 442287 (+) | True | G324085 |
