Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU383910 |
| length | 800 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G324064 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 326531 ~ 355303 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU383927 | lncRNA | upstream | 23322 | 301873 ~ 303209 (+) | False | tbx20 |
| TU383905 | lncRNA | upstream | 91700 | 233659 ~ 234831 (+) | True | LOC113523709 |
| XR_003402450.2 | lncRNA | upstream | 91952 | 233614 ~ 234579 (+) | False | LOC113523709 |
| TU383904 | lncRNA | upstream | 107432 | 218832 ~ 219099 (+) | True | G324060 |
| TU383892 | lncRNA | upstream | 132686 | 182506 ~ 193845 (+) | False | cmc1 |
| TU383950 | lncRNA | downstream | 3820 | 359123 ~ 361065 (+) | True | G324089 |
| TU383939 | lncRNA | downstream | 10185 | 365488 ~ 437810 (+) | False | G324083 |
| TU383937 | lncRNA | downstream | 80746 | 436049 ~ 437810 (+) | True | G324083 |
| TU383986 | lncRNA | downstream | 89474 | 444777 ~ 446125 (+) | True | G324116 |
| TU384039 | lncRNA | downstream | 188565 | 543868 ~ 548283 (+) | True | G324139 |
| XM_034298133.1 | mRNA | upstream | 5348 | 301880 ~ 321183 (+) | True | tbx20 |
| XM_034297886.1 | mRNA | upstream | 95037 | 222517 ~ 231494 (+) | True | zgc:114181 |
| XM_026909662.2 | mRNA | upstream | 132905 | 182467 ~ 193626 (+) | False | cmc1 |
| XM_026912119.2 | mRNA | upstream | 211385 | 108218 ~ 115146 (+) | True | ethe1 |
| XM_026912116.2 | mRNA | upstream | 218733 | 98037 ~ 107798 (+) | False | LOC113525556 |
| XM_034297869.1 | mRNA | downstream | 100213 | 455516 ~ 456979 (+) | True | LOC117595771 |
| XM_034297870.1 | mRNA | downstream | 100273 | 455576 ~ 456979 (+) | False | LOC117595771 |
| XM_034297821.1 | mRNA | downstream | 104910 | 460213 ~ 466623 (+) | True | LOC113524801 |
| XM_034298297.1 | mRNA | downstream | 114653 | 469956 ~ 483298 (+) | True | ppox |
| XM_034298298.1 | mRNA | downstream | 114672 | 469975 ~ 483298 (+) | False | ppox |
| TU383913 | other | upstream | 4757 | 315350 ~ 321774 (+) | False | tbx20 |
| TU383926 | other | upstream | 15298 | 306181 ~ 311233 (+) | False | tbx20 |
| TU383916 | other | upstream | 33943 | 241197 ~ 292588 (+) | True | G324068 |
| XR_003402678.2 | other | upstream | 292742 | 25296 ~ 33789 (+) | False | nod1 |
| TU383850 | other | upstream | 303321 | 22297 ~ 23210 (+) | True | G324020 |
| TU383942 | other | downstream | 83088 | 438391 ~ 442287 (+) | True | G324085 |
| TU383992 | other | downstream | 99607 | 454910 ~ 466625 (+) | True | G324120 |
| TU383993 | other | downstream | 99607 | 454910 ~ 466625 (+) | False | G324120 |
| TU384046 | other | downstream | 202112 | 557415 ~ 558139 (+) | True | G324143 |
| TU384003 | other | downstream | 250783 | 606086 ~ 606914 (+) | False | G324123 |
