Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384016 |
| length | 800 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G324123 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 567202 ~ 635045 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384059 | lncRNA | upstream | 6916 | 598410 ~ 599170 (+) | True | G324156 |
| TU384008 | lncRNA | upstream | 14488 | 567202 ~ 591598 (+) | True | G324123 |
| TU384020 | lncRNA | upstream | 17177 | 585179 ~ 588909 (+) | True | G324125 |
| TU384054 | lncRNA | upstream | 30948 | 573006 ~ 575138 (+) | True | G324151 |
| TU384043 | lncRNA | upstream | 48968 | 552723 ~ 557118 (+) | True | G324140 |
| TU384063 | lncRNA | downstream | 131 | 607045 ~ 607543 (+) | True | G324160 |
| TU384065 | lncRNA | downstream | 698 | 607612 ~ 608702 (+) | True | G324161 |
| TU384105 | lncRNA | downstream | 106481 | 713395 ~ 713801 (+) | True | G324197 |
| TU384127 | lncRNA | downstream | 142537 | 749451 ~ 753443 (+) | True | G324216 |
| TU384129 | lncRNA | downstream | 142537 | 749451 ~ 753443 (+) | False | G324216 |
| XM_026911132.2 | mRNA | upstream | 81929 | 505314 ~ 524157 (+) | True | zgc:162160 |
| XM_034298297.1 | mRNA | upstream | 122788 | 469956 ~ 483298 (+) | True | ppox |
| XM_034298298.1 | mRNA | upstream | 122788 | 469975 ~ 483298 (+) | False | ppox |
| XM_034297821.1 | mRNA | upstream | 139463 | 460213 ~ 466623 (+) | True | LOC113524801 |
| XM_034297870.1 | mRNA | upstream | 149107 | 455576 ~ 456979 (+) | False | LOC117595771 |
| XM_026911136.2 | mRNA | downstream | 44004 | 650918 ~ 657392 (+) | True | etsrp |
| XM_026911162.2 | mRNA | downstream | 51567 | 658481 ~ 663976 (+) | True | pycard |
| XM_026911161.2 | mRNA | downstream | 51567 | 658481 ~ 663976 (+) | False | pycard |
| XM_026911138.2 | mRNA | downstream | 67954 | 674868 ~ 680370 (+) | True | LOC113524791 |
| XM_034297823.1 | mRNA | downstream | 112475 | 719389 ~ 745520 (+) | True | gramd1a |
| TU384046 | other | upstream | 47947 | 557415 ~ 558139 (+) | True | G324143 |
| TU383992 | other | upstream | 139461 | 454910 ~ 466625 (+) | True | G324120 |
| TU383993 | other | upstream | 139461 | 454910 ~ 466625 (+) | False | G324120 |
| TU383942 | other | upstream | 163799 | 438391 ~ 442287 (+) | True | G324085 |
| TU383914 | other | upstream | 193977 | 354781 ~ 412109 (+) | True | G324067 |
| TU384064 | other | downstream | 698 | 607612 ~ 610009 (+) | False | G324161 |
| TU384116 | other | downstream | 138759 | 745673 ~ 748475 (+) | True | G324206 |
| XR_004576966.1 | other | downstream | 167375 | 774289 ~ 806528 (+) | True | psmc4 |
| XR_004576993.1 | other | downstream | 350211 | 957125 ~ 1010223 (+) | False | cpne4a |
| TU384187 | other | downstream | 511354 | 1118268 ~ 1163614 (+) | True | G324258 |
