Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384045 |
| length | 675 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G324142 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 555797 ~ 556519 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384039 | lncRNA | upstream | 7514 | 543868 ~ 548283 (+) | True | G324139 |
| TU384040 | lncRNA | upstream | 7514 | 543868 ~ 548283 (+) | False | G324139 |
| TU384041 | lncRNA | upstream | 7514 | 544666 ~ 548283 (+) | False | G324139 |
| TU383986 | lncRNA | upstream | 109672 | 444777 ~ 446125 (+) | True | G324116 |
| TU383937 | lncRNA | upstream | 117987 | 436049 ~ 437810 (+) | True | G324083 |
| TU384008 | lncRNA | downstream | 10683 | 567202 ~ 591598 (+) | True | G324123 |
| TU384014 | lncRNA | downstream | 10683 | 567202 ~ 606914 (+) | False | G324123 |
| TU384054 | lncRNA | downstream | 16487 | 573006 ~ 575138 (+) | True | G324151 |
| TU384020 | lncRNA | downstream | 28660 | 585179 ~ 588909 (+) | True | G324125 |
| TU384059 | lncRNA | downstream | 41891 | 598410 ~ 599170 (+) | True | G324156 |
| XM_026911132.2 | mRNA | upstream | 31640 | 505314 ~ 524157 (+) | True | zgc:162160 |
| XM_034298297.1 | mRNA | upstream | 72499 | 469956 ~ 483298 (+) | True | ppox |
| XM_034298298.1 | mRNA | upstream | 72499 | 469975 ~ 483298 (+) | False | ppox |
| XM_034297821.1 | mRNA | upstream | 89174 | 460213 ~ 466623 (+) | True | LOC113524801 |
| XM_034297870.1 | mRNA | upstream | 98818 | 455576 ~ 456979 (+) | False | LOC117595771 |
| XM_026911136.2 | mRNA | downstream | 94399 | 650918 ~ 657392 (+) | True | etsrp |
| XM_026911162.2 | mRNA | downstream | 101962 | 658481 ~ 663976 (+) | True | pycard |
| XM_026911161.2 | mRNA | downstream | 101962 | 658481 ~ 663976 (+) | False | pycard |
| XM_026911138.2 | mRNA | downstream | 118349 | 674868 ~ 680370 (+) | True | LOC113524791 |
| XM_034297823.1 | mRNA | downstream | 162870 | 719389 ~ 745520 (+) | True | gramd1a |
| TU383992 | other | upstream | 89172 | 454910 ~ 466625 (+) | True | G324120 |
| TU383993 | other | upstream | 89172 | 454910 ~ 466625 (+) | False | G324120 |
| TU383942 | other | upstream | 113510 | 438391 ~ 442287 (+) | True | G324085 |
| TU383914 | other | upstream | 143688 | 354781 ~ 412109 (+) | True | G324067 |
| TU383913 | other | upstream | 234023 | 315350 ~ 321774 (+) | False | tbx20 |
| TU384046 | other | downstream | 896 | 557415 ~ 558139 (+) | True | G324143 |
| TU384003 | other | downstream | 49567 | 606086 ~ 606914 (+) | False | G324123 |
| TU384064 | other | downstream | 51093 | 607612 ~ 610009 (+) | False | G324161 |
| TU384116 | other | downstream | 189154 | 745673 ~ 748475 (+) | True | G324206 |
| XR_004576966.1 | other | downstream | 217770 | 774289 ~ 806528 (+) | True | psmc4 |
