Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384059 |
| length | 725 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G324156 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 598410 ~ 599170 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384008 | lncRNA | upstream | 6812 | 567202 ~ 591598 (+) | True | G324123 |
| TU384020 | lncRNA | upstream | 9501 | 585179 ~ 588909 (+) | True | G324125 |
| TU384054 | lncRNA | upstream | 23272 | 573006 ~ 575138 (+) | True | G324151 |
| TU384043 | lncRNA | upstream | 41292 | 552723 ~ 557118 (+) | True | G324140 |
| TU384045 | lncRNA | upstream | 41891 | 555797 ~ 556519 (+) | True | G324142 |
| TU384002 | lncRNA | downstream | 6916 | 606086 ~ 635045 (+) | False | G324123 |
| TU384004 | lncRNA | downstream | 6916 | 606086 ~ 606914 (+) | False | G324123 |
| TU384011 | lncRNA | downstream | 6916 | 606086 ~ 606914 (+) | False | G324123 |
| TU384015 | lncRNA | downstream | 6916 | 606086 ~ 635045 (+) | False | G324123 |
| TU384016 | lncRNA | downstream | 6916 | 606086 ~ 606914 (+) | False | G324123 |
| XM_026911132.2 | mRNA | upstream | 74253 | 505314 ~ 524157 (+) | True | zgc:162160 |
| XM_034298297.1 | mRNA | upstream | 115112 | 469956 ~ 483298 (+) | True | ppox |
| XM_034298298.1 | mRNA | upstream | 115112 | 469975 ~ 483298 (+) | False | ppox |
| XM_034297821.1 | mRNA | upstream | 131787 | 460213 ~ 466623 (+) | True | LOC113524801 |
| XM_034297870.1 | mRNA | upstream | 141431 | 455576 ~ 456979 (+) | False | LOC117595771 |
| XM_026911136.2 | mRNA | downstream | 51748 | 650918 ~ 657392 (+) | True | etsrp |
| XM_026911162.2 | mRNA | downstream | 59311 | 658481 ~ 663976 (+) | True | pycard |
| XM_026911161.2 | mRNA | downstream | 59311 | 658481 ~ 663976 (+) | False | pycard |
| XM_026911138.2 | mRNA | downstream | 75698 | 674868 ~ 680370 (+) | True | LOC113524791 |
| XM_034297823.1 | mRNA | downstream | 120219 | 719389 ~ 745520 (+) | True | gramd1a |
| TU384046 | other | upstream | 40271 | 557415 ~ 558139 (+) | True | G324143 |
| TU383992 | other | upstream | 131785 | 454910 ~ 466625 (+) | True | G324120 |
| TU383993 | other | upstream | 131785 | 454910 ~ 466625 (+) | False | G324120 |
| TU383942 | other | upstream | 156123 | 438391 ~ 442287 (+) | True | G324085 |
| TU383914 | other | upstream | 186301 | 354781 ~ 412109 (+) | True | G324067 |
| TU384003 | other | downstream | 6916 | 606086 ~ 606914 (+) | False | G324123 |
| TU384064 | other | downstream | 8442 | 607612 ~ 610009 (+) | False | G324161 |
| TU384116 | other | downstream | 146503 | 745673 ~ 748475 (+) | True | G324206 |
| XR_004576966.1 | other | downstream | 175119 | 774289 ~ 806528 (+) | True | psmc4 |
| XR_004576993.1 | other | downstream | 357955 | 957125 ~ 1010223 (+) | False | cpne4a |
