Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034297978.1 |
| length | 978 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | LOC113523705 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 199459 ~ 211469 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384424 | lncRNA | downstream | 113972 | 90902 ~ 91291 (-) | True | G324465 |
| TU384409 | lncRNA | downstream | 148433 | 56373 ~ 56830 (-) | True | G324450 |
| TU384408 | lncRNA | downstream | 149477 | 55495 ~ 55786 (-) | True | G324449 |
| TU383849 | lncRNA | downstream | 186515 | 18544 ~ 18748 (-) | True | G324019 |
| TU383847 | lncRNA | downstream | 189483 | 15478 ~ 15780 (-) | True | G324017 |
| TU384459 | lncRNA | upstream | 9777 | 218778 ~ 219050 (-) | True | G324481 |
| TU384460 | lncRNA | upstream | 15117 | 224118 ~ 224913 (-) | True | G324482 |
| TU384468 | lncRNA | upstream | 25505 | 234506 ~ 331761 (-) | False | herpud2 |
| TU384471 | lncRNA | upstream | 38959 | 247960 ~ 249715 (-) | True | G324488 |
| TU384490 | lncRNA | upstream | 88234 | 297235 ~ 321868 (-) | True | G324498 |
| XM_034297976.1 | mRNA | downstream | 1526 | 194648 ~ 203737 (-) | False | azi2 |
| XM_034297975.1 | mRNA | downstream | 1527 | 194648 ~ 203736 (-) | True | azi2 |
| XM_026909661.2 | mRNA | downstream | 46684 | 148605 ~ 158579 (-) | True | eomesb |
| XM_026909658.2 | mRNA | downstream | 58125 | 137689 ~ 147138 (-) | True | kdf1a |
| XM_034298141.1 | mRNA | downstream | 143711 | 58422 ~ 61552 (-) | False | LOC113525569 |
| XM_034298132.1 | mRNA | upstream | 93660 | 302661 ~ 331083 (-) | False | herpud2 |
| XM_034298131.1 | mRNA | upstream | 109403 | 318404 ~ 331083 (-) | False | herpud2 |
| XM_034298130.1 | mRNA | upstream | 117944 | 326945 ~ 331083 (-) | True | herpud2 |
| XM_034298019.1 | mRNA | upstream | 142886 | 351887 ~ 396573 (-) | True | slc4a7 |
| XM_034297797.1 | mRNA | upstream | 188031 | 397032 ~ 400945 (-) | False | pkdc |
| TU384497 | other | upstream | 141737 | 350738 ~ 356621 (-) | False | slc4a7 |
| TU384506 | other | upstream | 141737 | 350738 ~ 356621 (-) | False | slc4a7 |
| TU384611 | other | upstream | 517626 | 726627 ~ 727634 (-) | True | G324579 |
| XR_004576952.1 | other | upstream | 838582 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384829 | other | upstream | 1161475 | 1370476 ~ 1371029 (-) | True | G324748 |
