Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384490 |
| length | 929 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G324498 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 297235 ~ 321868 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384471 | lncRNA | downstream | 47520 | 247960 ~ 249715 (-) | True | G324488 |
| TU384460 | lncRNA | downstream | 72322 | 224118 ~ 224913 (-) | True | G324482 |
| TU384459 | lncRNA | downstream | 78185 | 218778 ~ 219050 (-) | True | G324481 |
| TU384445 | lncRNA | downstream | 91098 | 199459 ~ 206137 (-) | False | LOC113523705 |
| TU384424 | lncRNA | downstream | 205944 | 90902 ~ 91291 (-) | True | G324465 |
| TU384525 | lncRNA | upstream | 32121 | 353989 ~ 354632 (-) | True | G324516 |
| TU384521 | lncRNA | upstream | 52331 | 374199 ~ 443951 (-) | False | smarcc1a |
| TU384573 | lncRNA | upstream | 247721 | 569589 ~ 570151 (-) | True | G324544 |
| TU384486 | lncRNA | upstream | 248415 | 570283 ~ 575149 (-) | False | dyrk1b |
| TU384574 | lncRNA | upstream | 261024 | 582892 ~ 583557 (-) | True | G324545 |
| XM_034297977.1 | mRNA | downstream | 85766 | 205263 ~ 211469 (-) | False | LOC113523705 |
| XM_034297978.1 | mRNA | downstream | 88234 | 205263 ~ 209001 (-) | True | LOC113523705 |
| XM_034297976.1 | mRNA | downstream | 93498 | 194648 ~ 203737 (-) | False | azi2 |
| XM_034297975.1 | mRNA | downstream | 93499 | 194648 ~ 203736 (-) | True | azi2 |
| XM_026909661.2 | mRNA | downstream | 138656 | 148605 ~ 158579 (-) | True | eomesb |
| XM_034298130.1 | mRNA | upstream | 5077 | 326945 ~ 331083 (-) | True | herpud2 |
| XM_034298019.1 | mRNA | upstream | 30019 | 351887 ~ 396573 (-) | True | slc4a7 |
| XM_034297797.1 | mRNA | upstream | 75164 | 397032 ~ 400945 (-) | False | pkdc |
| XM_026911134.2 | mRNA | upstream | 75164 | 397032 ~ 400930 (-) | True | pkdc |
| XM_034298287.1 | mRNA | upstream | 82236 | 404104 ~ 428410 (-) | False | cspg5a |
| TU384497 | other | upstream | 28870 | 350738 ~ 356621 (-) | False | slc4a7 |
| TU384506 | other | upstream | 28870 | 350738 ~ 356621 (-) | False | slc4a7 |
| TU384611 | other | upstream | 404759 | 726627 ~ 727634 (-) | True | G324579 |
| XR_004576952.1 | other | upstream | 725715 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384829 | other | upstream | 1048608 | 1370476 ~ 1371029 (-) | True | G324748 |
