Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384579 |
| length | 340 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G324549 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 635704 ~ 636105 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384574 | lncRNA | downstream | 52147 | 582892 ~ 583557 (-) | True | G324545 |
| TU384486 | lncRNA | downstream | 60555 | 570283 ~ 575149 (-) | False | dyrk1b |
| TU384573 | lncRNA | downstream | 65553 | 569589 ~ 570151 (-) | True | G324544 |
| TU384521 | lncRNA | downstream | 191753 | 374199 ~ 443951 (-) | False | smarcc1a |
| TU384525 | lncRNA | downstream | 281072 | 353989 ~ 354632 (-) | True | G324516 |
| XR_004576941.1 | lncRNA | upstream | 21217 | 657322 ~ 658118 (-) | True | LOC117595770 |
| TU384592 | lncRNA | upstream | 44743 | 680848 ~ 681481 (-) | True | G324562 |
| TU384594 | lncRNA | upstream | 59117 | 695222 ~ 701258 (-) | False | G324563 |
| XR_004576945.1 | lncRNA | upstream | 59214 | 695319 ~ 698441 (-) | False | LOC113524793 |
| XR_004576944.1 | lncRNA | upstream | 59214 | 695319 ~ 698441 (-) | False | LOC113524793 |
| XM_026911137.2 | mRNA | downstream | 23584 | 606087 ~ 612120 (-) | True | fbl |
| XM_026911130.2 | mRNA | downstream | 30689 | 598396 ~ 605015 (-) | True | alkbh8 |
| XM_034297808.1 | mRNA | downstream | 30906 | 598396 ~ 604798 (-) | False | alkbh8 |
| XM_034298128.1 | mRNA | downstream | 60433 | 549060 ~ 575271 (-) | True | dyrk1b |
| XM_034298129.1 | mRNA | downstream | 91671 | 538195 ~ 544033 (-) | True | LOC113524795 |
| XM_026911139.2 | mRNA | upstream | 27957 | 664062 ~ 670835 (-) | True | si:ch211-225p5.8 |
| XM_034298198.1 | mRNA | upstream | 116537 | 752642 ~ 770971 (-) | False | scn1ba |
| XM_034298197.1 | mRNA | upstream | 117132 | 753237 ~ 770971 (-) | False | scn1ba |
| XM_034298199.1 | mRNA | upstream | 117138 | 753243 ~ 770973 (-) | True | scn1ba |
| XM_034298118.1 | mRNA | upstream | 184517 | 820622 ~ 831921 (-) | True | mtdhb |
| TU384497 | other | downstream | 279083 | 350738 ~ 356621 (-) | False | slc4a7 |
| TU384611 | other | upstream | 90522 | 726627 ~ 727634 (-) | True | G324579 |
| XR_004576952.1 | other | upstream | 411478 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384829 | other | upstream | 734371 | 1370476 ~ 1371029 (-) | True | G324748 |
| TU384835 | other | upstream | 793827 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU385328 | other | upstream | 1452154 | 2088259 ~ 2097435 (-) | True | G325145 |
