Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384643 |
| length | 260 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G324602 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 791946 ~ 792487 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384626 | lncRNA | downstream | 8853 | 743547 ~ 783093 (-) | True | G324589 |
| TU384617 | lncRNA | downstream | 9620 | 781085 ~ 782326 (-) | True | G324584 |
| TU384613 | lncRNA | downstream | 43445 | 727811 ~ 748501 (-) | True | G324581 |
| TU384612 | lncRNA | downstream | 44382 | 747019 ~ 747564 (-) | True | G324580 |
| TU384602 | lncRNA | downstream | 78161 | 713329 ~ 713785 (-) | True | G324571 |
| TU384662 | lncRNA | upstream | 19852 | 812339 ~ 814333 (-) | False | G324616 |
| TU384663 | lncRNA | upstream | 19852 | 812339 ~ 813090 (-) | True | G324616 |
| TU384669 | lncRNA | upstream | 49779 | 842266 ~ 842622 (-) | True | G324622 |
| TU384711 | lncRNA | upstream | 88122 | 880609 ~ 955392 (-) | False | G324649 |
| TU384715 | lncRNA | upstream | 89152 | 881639 ~ 882286 (-) | True | G324650 |
| XM_034298199.1 | mRNA | downstream | 20973 | 753243 ~ 770973 (-) | True | scn1ba |
| XM_034298198.1 | mRNA | downstream | 20975 | 752642 ~ 770971 (-) | False | scn1ba |
| XM_034298197.1 | mRNA | downstream | 20975 | 753237 ~ 770971 (-) | False | scn1ba |
| XM_026911139.2 | mRNA | downstream | 121111 | 664062 ~ 670835 (-) | True | si:ch211-225p5.8 |
| XM_026911160.2 | mRNA | downstream | 150439 | 613922 ~ 641507 (-) | True | fli1rs |
| XM_034298118.1 | mRNA | upstream | 28135 | 820622 ~ 831921 (-) | True | mtdhb |
| XM_034298084.1 | mRNA | upstream | 55348 | 847835 ~ 856733 (-) | False | ubxn11 |
| XM_034298083.1 | mRNA | upstream | 55348 | 847835 ~ 856733 (-) | True | ubxn11 |
| XM_026911505.2 | mRNA | upstream | 104839 | 897326 ~ 902262 (-) | True | LOC113525074 |
| XM_026911513.2 | mRNA | upstream | 123432 | 915919 ~ 919909 (-) | True | si:dkey-11p23.7 |
| TU384611 | other | downstream | 64312 | 726627 ~ 727634 (-) | True | G324579 |
| TU384497 | other | downstream | 435325 | 350738 ~ 356621 (-) | False | slc4a7 |
| XR_004576952.1 | other | upstream | 255096 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384829 | other | upstream | 577989 | 1370476 ~ 1371029 (-) | True | G324748 |
| TU384835 | other | upstream | 637445 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU385328 | other | upstream | 1295772 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU386070 | other | upstream | 2445214 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
