Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384669 |
| length | 306 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G324622 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 842266 ~ 842622 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384662 | lncRNA | downstream | 27933 | 812339 ~ 814333 (-) | False | G324616 |
| TU384663 | lncRNA | downstream | 29176 | 812339 ~ 813090 (-) | True | G324616 |
| TU384643 | lncRNA | downstream | 49779 | 791946 ~ 792487 (-) | True | G324602 |
| TU384626 | lncRNA | downstream | 59173 | 743547 ~ 783093 (-) | True | G324589 |
| TU384617 | lncRNA | downstream | 59940 | 781085 ~ 782326 (-) | True | G324584 |
| TU384711 | lncRNA | upstream | 37987 | 880609 ~ 955392 (-) | False | G324649 |
| TU384715 | lncRNA | upstream | 39017 | 881639 ~ 882286 (-) | True | G324650 |
| TU384714 | lncRNA | upstream | 39242 | 881864 ~ 882286 (-) | False | G324650 |
| TU384710 | lncRNA | upstream | 44669 | 887291 ~ 955392 (-) | False | G324649 |
| TU384712 | lncRNA | upstream | 109228 | 951850 ~ 955392 (-) | False | G324649 |
| XM_034298118.1 | mRNA | downstream | 10345 | 820622 ~ 831921 (-) | True | mtdhb |
| XM_034298199.1 | mRNA | downstream | 71293 | 753243 ~ 770973 (-) | True | scn1ba |
| XM_034298198.1 | mRNA | downstream | 71295 | 752642 ~ 770971 (-) | False | scn1ba |
| XM_034298197.1 | mRNA | downstream | 71295 | 753237 ~ 770971 (-) | False | scn1ba |
| XM_026911139.2 | mRNA | downstream | 171431 | 664062 ~ 670835 (-) | True | si:ch211-225p5.8 |
| XM_034298084.1 | mRNA | upstream | 5213 | 847835 ~ 856733 (-) | False | ubxn11 |
| XM_034298083.1 | mRNA | upstream | 5213 | 847835 ~ 856733 (-) | True | ubxn11 |
| XM_026911505.2 | mRNA | upstream | 54704 | 897326 ~ 902262 (-) | True | LOC113525074 |
| XM_026911513.2 | mRNA | upstream | 73297 | 915919 ~ 919909 (-) | True | si:dkey-11p23.7 |
| XM_034297959.1 | mRNA | upstream | 200691 | 1043313 ~ 1102117 (-) | False | nek11 |
| TU384611 | other | downstream | 114632 | 726627 ~ 727634 (-) | True | G324579 |
| TU384497 | other | downstream | 485645 | 350738 ~ 356621 (-) | False | slc4a7 |
| XR_004576952.1 | other | upstream | 204961 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384829 | other | upstream | 527854 | 1370476 ~ 1371029 (-) | True | G324748 |
| TU384835 | other | upstream | 587310 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU385328 | other | upstream | 1245637 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU386070 | other | upstream | 2395079 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
