Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384710 |
| length | 465 |
| lncRNA type | read_through |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G324649 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 880609 ~ 955392 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384715 | lncRNA | downstream | 5005 | 881639 ~ 882286 (-) | True | G324650 |
| TU384714 | lncRNA | downstream | 5005 | 881864 ~ 882286 (-) | False | G324650 |
| TU384669 | lncRNA | downstream | 44669 | 842266 ~ 842622 (-) | True | G324622 |
| TU384662 | lncRNA | downstream | 72958 | 812339 ~ 814333 (-) | False | G324616 |
| TU384663 | lncRNA | downstream | 74201 | 812339 ~ 813090 (-) | True | G324616 |
| TU384805 | lncRNA | upstream | 164379 | 1119771 ~ 1186077 (-) | True | G324726 |
| TU384808 | lncRNA | upstream | 171452 | 1126844 ~ 1127617 (-) | True | G324729 |
| TU384810 | lncRNA | upstream | 189194 | 1144586 ~ 1169331 (-) | True | G324731 |
| TU384797 | lncRNA | upstream | 339473 | 1294865 ~ 1314580 (-) | False | scap |
| TU384802 | lncRNA | upstream | 447897 | 1403289 ~ 1405287 (-) | False | kif13a |
| XM_034298084.1 | mRNA | downstream | 30558 | 847835 ~ 856733 (-) | False | ubxn11 |
| XM_034298083.1 | mRNA | downstream | 30558 | 847835 ~ 856733 (-) | True | ubxn11 |
| XM_034298118.1 | mRNA | downstream | 55370 | 820622 ~ 831921 (-) | True | mtdhb |
| XM_034298199.1 | mRNA | downstream | 116318 | 753243 ~ 770973 (-) | True | scn1ba |
| XM_034298197.1 | mRNA | downstream | 116320 | 753237 ~ 770971 (-) | False | scn1ba |
| XM_034297959.1 | mRNA | upstream | 87921 | 1043313 ~ 1102117 (-) | False | nek11 |
| XM_026911508.2 | mRNA | upstream | 92191 | 1047583 ~ 1102117 (-) | False | nek11 |
| XM_034297958.1 | mRNA | upstream | 92191 | 1047583 ~ 1102117 (-) | False | nek11 |
| XM_034297960.1 | mRNA | upstream | 92342 | 1047734 ~ 1102117 (-) | False | nek11 |
| XM_034298036.1 | mRNA | upstream | 170512 | 1125904 ~ 1234282 (-) | False | LOC117595783 |
| TU384611 | other | downstream | 159657 | 726627 ~ 727634 (-) | True | G324579 |
| TU384497 | other | downstream | 530670 | 350738 ~ 356621 (-) | False | slc4a7 |
| XR_004576952.1 | other | upstream | 92191 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384829 | other | upstream | 415084 | 1370476 ~ 1371029 (-) | True | G324748 |
| TU384835 | other | upstream | 474540 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU385328 | other | upstream | 1132867 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU386070 | other | upstream | 2282309 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
