Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU384934 |
| length | 734 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G324831 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 1655128 ~ 1655861 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU384935 | lncRNA | upstream | 1538 | 1652671 ~ 1653590 (+) | True | G324832 |
| TU384931 | lncRNA | upstream | 4190 | 1650037 ~ 1650938 (+) | True | G324830 |
| TU384929 | lncRNA | upstream | 4363 | 1650037 ~ 1650765 (+) | False | G324830 |
| TU384895 | lncRNA | upstream | 35255 | 1592483 ~ 1619873 (+) | False | G324799 |
| TU384946 | lncRNA | downstream | 11699 | 1667560 ~ 1667843 (+) | True | G324842 |
| TU385013 | lncRNA | downstream | 79758 | 1735619 ~ 1739255 (+) | True | G324889 |
| TU385084 | lncRNA | downstream | 243782 | 1899643 ~ 1902697 (+) | False | smg5 |
| TU385089 | lncRNA | downstream | 271219 | 1927080 ~ 1932326 (+) | True | G324947 |
| TU385237 | lncRNA | downstream | 337395 | 1993256 ~ 2011981 (+) | False | G325076 |
| XM_034297827.1 | mRNA | upstream | 170599 | 1481899 ~ 1484529 (+) | False | si:ch211-269k10.4 |
| XM_034297830.1 | mRNA | upstream | 170599 | 1481909 ~ 1484529 (+) | False | si:ch211-269k10.4 |
| XM_034297831.1 | mRNA | upstream | 170599 | 1481912 ~ 1484529 (+) | False | si:ch211-269k10.4 |
| XM_034297829.1 | mRNA | upstream | 170599 | 1481913 ~ 1484529 (+) | True | si:ch211-269k10.4 |
| XM_026924349.2 | mRNA | upstream | 344414 | 1296876 ~ 1310714 (+) | True | ptpn23a |
| XM_034298234.1 | mRNA | downstream | 52571 | 1708432 ~ 1713392 (+) | True | LOC113532957 |
| XM_026924961.2 | mRNA | downstream | 68270 | 1724131 ~ 1734131 (+) | True | dnase2 |
| XM_034297931.1 | mRNA | downstream | 114967 | 1770828 ~ 1788284 (+) | False | phf1 |
| XM_034297933.1 | mRNA | downstream | 114979 | 1770840 ~ 1788284 (+) | False | phf1 |
| XM_034297930.1 | mRNA | downstream | 115284 | 1771145 ~ 1788284 (+) | True | phf1 |
| TU384187 | other | upstream | 491514 | 1118268 ~ 1163614 (+) | True | G324258 |
| XR_004576993.1 | other | upstream | 644905 | 957125 ~ 1010223 (+) | False | cpne4a |
| XR_004576966.1 | other | upstream | 848600 | 774289 ~ 806528 (+) | True | psmc4 |
| TU384116 | other | upstream | 906653 | 745673 ~ 748475 (+) | True | G324206 |
| TU384064 | other | upstream | 1045119 | 607612 ~ 610009 (+) | False | G324161 |
| TU385279 | other | downstream | 486645 | 2142506 ~ 2144511 (+) | False | bola1 |
| XR_003403389.2 | other | downstream | 554361 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | downstream | 554361 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385671 | other | downstream | 909839 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU386582 | other | downstream | 2355549 | 4011410 ~ 4013538 (+) | False | hamp |
