Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU385131 |
| length | 205 |
| lncRNA type | intronic |
| GC content | 0.30 |
| exon number | 2 |
| gene id | G324980 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 1747657 ~ 1748008 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU385117 | lncRNA | downstream | 22893 | 1724010 ~ 1724764 (-) | True | G324970 |
| TU384971 | lncRNA | downstream | 72750 | 1669102 ~ 1674907 (-) | True | LOC117595768 |
| TU384972 | lncRNA | downstream | 72750 | 1669102 ~ 1674907 (-) | False | LOC117595768 |
| TU384975 | lncRNA | downstream | 72750 | 1669102 ~ 1674907 (-) | False | LOC117595768 |
| XR_004576939.1 | lncRNA | downstream | 72758 | 1671701 ~ 1674899 (-) | False | LOC117595768 |
| TU385155 | lncRNA | upstream | 149703 | 1897711 ~ 1898181 (-) | True | G325003 |
| TU385208 | lncRNA | upstream | 158935 | 1906943 ~ 1948211 (-) | True | G325056 |
| TU385210 | lncRNA | upstream | 171263 | 1919271 ~ 1920472 (-) | True | G325058 |
| TU385254 | lncRNA | upstream | 272172 | 2020180 ~ 2020405 (-) | True | G325090 |
| TU385304 | lncRNA | upstream | 307175 | 2055183 ~ 2140101 (-) | False | LOC113532493 |
| XM_026924728.2 | mRNA | downstream | 29064 | 1714275 ~ 1718593 (-) | True | si:dkey-33i11.1 |
| XM_034298233.1 | mRNA | downstream | 39411 | 1686703 ~ 1708246 (-) | False | hpn |
| XM_026924699.2 | mRNA | downstream | 39411 | 1686708 ~ 1708246 (-) | True | hpn |
| XM_026924811.2 | mRNA | downstream | 79920 | 1650037 ~ 1667737 (-) | True | LOC113533022 |
| XM_026923925.2 | mRNA | downstream | 109038 | 1631443 ~ 1638619 (-) | True | LOC113532527 |
| XM_026924079.2 | mRNA | upstream | 204822 | 1952830 ~ 1976952 (-) | False | ntrk1 |
| XM_026924078.2 | mRNA | upstream | 204822 | 1952830 ~ 1976952 (-) | True | ntrk1 |
| XM_026924695.2 | mRNA | upstream | 262181 | 2010189 ~ 2011797 (-) | True | LOC113532949 |
| XM_034297949.1 | mRNA | upstream | 262181 | 2010189 ~ 2011739 (-) | False | LOC113532949 |
| XM_026924301.1 | mRNA | upstream | 520002 | 2268010 ~ 2272046 (-) | True | tmem176l.1 |
| TU384835 | other | downstream | 296941 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU384829 | other | downstream | 376628 | 1370476 ~ 1371029 (-) | True | G324748 |
| XR_004576952.1 | other | downstream | 645540 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384611 | other | downstream | 1020023 | 726627 ~ 727634 (-) | True | G324579 |
| TU384506 | other | downstream | 1391036 | 350738 ~ 356621 (-) | False | slc4a7 |
| TU385328 | other | upstream | 340251 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU386070 | other | upstream | 1489693 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
| TU387191 | other | upstream | 3215609 | 4963617 ~ 4977453 (-) | False | ubr5 |
| TU387192 | other | upstream | 3215609 | 4963617 ~ 4977527 (-) | False | ubr5 |
| XR_003403372.2 | other | upstream | 4081466 | 5829474 ~ 5978379 (-) | False | zfpm2a |
