Item | Value |
---|---|
RNA id | TU385253 |
length | 205 |
lncRNA type | inter_gene |
GC content | 0.52 |
exon number | 1 |
gene id | G325089 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 2020184 ~ 2020388 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU385237 | lncRNA | upstream | 8203 | 1993256 ~ 2011981 (+) | False | G325076 |
TU385235 | lncRNA | upstream | 8203 | 2009334 ~ 2011981 (+) | True | G325076 |
XR_004576937.1 | lncRNA | upstream | 19180 | 2000137 ~ 2001004 (+) | True | LOC117595767 |
TU385089 | lncRNA | upstream | 87858 | 1927080 ~ 1932326 (+) | True | G324947 |
TU385084 | lncRNA | upstream | 117487 | 1899643 ~ 1902697 (+) | False | smg5 |
TU385460 | lncRNA | downstream | 314491 | 2334879 ~ 2335106 (+) | True | G325247 |
TU385483 | lncRNA | downstream | 376285 | 2396673 ~ 2396887 (+) | True | G325268 |
TU385486 | lncRNA | downstream | 380082 | 2400470 ~ 2400684 (+) | True | G325271 |
TU385672 | lncRNA | downstream | 547591 | 2567979 ~ 2569739 (+) | True | G325435 |
TU385717 | lncRNA | downstream | 623653 | 2644041 ~ 2647583 (+) | True | G325462 |
XM_026923877.2 | mRNA | upstream | 1132 | 2014611 ~ 2019052 (+) | True | rbm8a |
XM_026924081.2 | mRNA | upstream | 76894 | 1925582 ~ 1943290 (+) | True | paqr6 |
XM_034298254.1 | mRNA | upstream | 100474 | 1899626 ~ 1919710 (+) | True | smg5 |
XM_026924189.2 | mRNA | upstream | 124227 | 1846686 ~ 1895957 (+) | True | syngap1b |
XM_026924481.2 | mRNA | downstream | 1027 | 2021415 ~ 2055739 (+) | True | otud7b |
XM_026924482.2 | mRNA | downstream | 1027 | 2021415 ~ 2055739 (+) | False | otud7b |
XM_026924483.2 | mRNA | downstream | 23397 | 2043785 ~ 2055739 (+) | False | otud7b |
XM_034298164.1 | mRNA | downstream | 39152 | 2059540 ~ 2091481 (+) | True | mtmr11 |
XM_026924609.2 | mRNA | downstream | 48587 | 2068975 ~ 2091481 (+) | False | mtmr11 |
TU384187 | other | upstream | 856570 | 1118268 ~ 1163614 (+) | True | G324258 |
XR_004576993.1 | other | upstream | 1009961 | 957125 ~ 1010223 (+) | False | cpne4a |
XR_004576966.1 | other | upstream | 1213656 | 774289 ~ 806528 (+) | True | psmc4 |
TU384116 | other | upstream | 1271709 | 745673 ~ 748475 (+) | True | G324206 |
TU384064 | other | upstream | 1410175 | 607612 ~ 610009 (+) | False | G324161 |
TU385279 | other | downstream | 122118 | 2142506 ~ 2144511 (+) | False | bola1 |
XR_003403389.2 | other | downstream | 189834 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
XR_003403390.2 | other | downstream | 189834 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
TU385671 | other | downstream | 545312 | 2565700 ~ 2569739 (+) | False | G325435 |
TU386582 | other | downstream | 1991022 | 4011410 ~ 4013538 (+) | False | hamp |