Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU385486 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G325271 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 2400470 ~ 2400684 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU385483 | lncRNA | upstream | 3583 | 2396673 ~ 2396887 (+) | True | G325268 |
| TU385460 | lncRNA | upstream | 65364 | 2334879 ~ 2335106 (+) | True | G325247 |
| TU385253 | lncRNA | upstream | 380082 | 2020184 ~ 2020388 (+) | True | G325089 |
| TU385237 | lncRNA | upstream | 388489 | 1993256 ~ 2011981 (+) | False | G325076 |
| TU385672 | lncRNA | downstream | 167295 | 2567979 ~ 2569739 (+) | True | G325435 |
| TU385717 | lncRNA | downstream | 243357 | 2644041 ~ 2647583 (+) | True | G325462 |
| TU385973 | lncRNA | downstream | 671165 | 3071849 ~ 3072073 (+) | True | G325697 |
| TU386009 | lncRNA | downstream | 738628 | 3139312 ~ 3208962 (+) | True | G325730 |
| TU386041 | lncRNA | downstream | 858245 | 3258929 ~ 3260181 (+) | True | G325754 |
| XM_034297943.1 | mRNA | upstream | 28030 | 2364753 ~ 2372440 (+) | True | rab11al |
| XM_026924736.2 | mRNA | upstream | 37471 | 2358315 ~ 2362999 (+) | False | rab25b |
| XM_026924737.2 | mRNA | upstream | 37471 | 2358328 ~ 2362999 (+) | True | rab25b |
| XM_026924622.2 | mRNA | upstream | 44254 | 2354104 ~ 2356216 (+) | True | lamtor2 |
| XM_026924439.2 | mRNA | upstream | 50951 | 2339453 ~ 2349519 (+) | True | ubqln4 |
| XM_026924899.2 | mRNA | downstream | 26060 | 2426744 ~ 2537060 (+) | True | LOC113533066 |
| XM_026924898.2 | mRNA | downstream | 26060 | 2426744 ~ 2536418 (+) | False | LOC113533066 |
| XM_034297832.1 | mRNA | downstream | 142258 | 2542942 ~ 2549897 (+) | True | LOC113532859 |
| XM_026924042.2 | mRNA | downstream | 153436 | 2554120 ~ 2563081 (+) | True | ica1 |
| XM_026924043.2 | mRNA | downstream | 153436 | 2554120 ~ 2563081 (+) | False | ica1 |
| XR_003403389.2 | other | upstream | 186171 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 186209 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 255959 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU384187 | other | upstream | 1236856 | 1118268 ~ 1163614 (+) | True | G324258 |
| XR_004576993.1 | other | upstream | 1390247 | 957125 ~ 1010223 (+) | False | cpne4a |
| TU385671 | other | downstream | 165016 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU386582 | other | downstream | 1610726 | 4011410 ~ 4013538 (+) | False | hamp |
| TU386810 | other | downstream | 2520296 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 2524102 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 2931584 | 5332268 ~ 5338251 (+) | True | G326997 |
