Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU385672 |
| length | 1237 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G325435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 2565700 ~ 2569739 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU385486 | lncRNA | upstream | 167295 | 2400470 ~ 2400684 (+) | True | G325271 |
| TU385483 | lncRNA | upstream | 171092 | 2396673 ~ 2396887 (+) | True | G325268 |
| TU385460 | lncRNA | upstream | 232873 | 2334879 ~ 2335106 (+) | True | G325247 |
| TU385253 | lncRNA | upstream | 547591 | 2020184 ~ 2020388 (+) | True | G325089 |
| TU385235 | lncRNA | upstream | 555998 | 2009334 ~ 2011981 (+) | True | G325076 |
| TU385717 | lncRNA | downstream | 74302 | 2644041 ~ 2647583 (+) | True | G325462 |
| TU385973 | lncRNA | downstream | 502110 | 3071849 ~ 3072073 (+) | True | G325697 |
| TU386009 | lncRNA | downstream | 569573 | 3139312 ~ 3208962 (+) | True | G325730 |
| TU386041 | lncRNA | downstream | 689190 | 3258929 ~ 3260181 (+) | True | G325754 |
| TU386119 | lncRNA | downstream | 750178 | 3319917 ~ 3322330 (+) | True | G325815 |
| XM_026924042.2 | mRNA | upstream | 4898 | 2554120 ~ 2563081 (+) | True | ica1 |
| XM_026924043.2 | mRNA | upstream | 4898 | 2554120 ~ 2563081 (+) | False | ica1 |
| XM_034297929.1 | mRNA | upstream | 4898 | 2554147 ~ 2563081 (+) | False | ica1 |
| XM_034297832.1 | mRNA | upstream | 18082 | 2542942 ~ 2549897 (+) | True | LOC113532859 |
| XM_026924899.2 | mRNA | upstream | 30919 | 2426744 ~ 2537060 (+) | True | LOC113533066 |
| XM_026924423.2 | mRNA | downstream | 13480 | 2583219 ~ 2607036 (+) | True | col28a1b |
| XM_034297894.1 | mRNA | downstream | 77042 | 2646781 ~ 2656914 (+) | True | slc25a32b |
| XM_034297895.1 | mRNA | downstream | 78746 | 2648485 ~ 2654376 (+) | False | slc25a32b |
| XM_026924446.2 | mRNA | downstream | 670703 | 3240442 ~ 3251360 (+) | False | pbx2 |
| XM_026924447.2 | mRNA | downstream | 670703 | 3240442 ~ 3251360 (+) | False | pbx2 |
| XR_003403389.2 | other | upstream | 353680 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 353718 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 423468 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU384187 | other | upstream | 1404365 | 1118268 ~ 1163614 (+) | True | G324258 |
| XR_004576993.1 | other | upstream | 1557756 | 957125 ~ 1010223 (+) | False | cpne4a |
| TU386582 | other | downstream | 1441671 | 4011410 ~ 4013538 (+) | False | hamp |
| TU386810 | other | downstream | 2351241 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 2355047 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 2762529 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 5332053 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
