Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU385717 |
| length | 507 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G325462 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 2644041 ~ 2647583 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU385672 | lncRNA | upstream | 74302 | 2567979 ~ 2569739 (+) | True | G325435 |
| TU385486 | lncRNA | upstream | 243357 | 2400470 ~ 2400684 (+) | True | G325271 |
| TU385483 | lncRNA | upstream | 247154 | 2396673 ~ 2396887 (+) | True | G325268 |
| TU385460 | lncRNA | upstream | 308935 | 2334879 ~ 2335106 (+) | True | G325247 |
| TU385253 | lncRNA | upstream | 623653 | 2020184 ~ 2020388 (+) | True | G325089 |
| TU385973 | lncRNA | downstream | 424266 | 3071849 ~ 3072073 (+) | True | G325697 |
| TU386009 | lncRNA | downstream | 491729 | 3139312 ~ 3208962 (+) | True | G325730 |
| TU386041 | lncRNA | downstream | 611346 | 3258929 ~ 3260181 (+) | True | G325754 |
| TU386119 | lncRNA | downstream | 672334 | 3319917 ~ 3322330 (+) | True | G325815 |
| TU386344 | lncRNA | downstream | 1053751 | 3701334 ~ 3702153 (+) | True | G326023 |
| XM_026924423.2 | mRNA | upstream | 37005 | 2583219 ~ 2607036 (+) | True | col28a1b |
| XM_026924042.2 | mRNA | upstream | 80960 | 2554120 ~ 2563081 (+) | True | ica1 |
| XM_026924043.2 | mRNA | upstream | 80960 | 2554120 ~ 2563081 (+) | False | ica1 |
| XM_034297929.1 | mRNA | upstream | 80960 | 2554147 ~ 2563081 (+) | False | ica1 |
| XM_034297832.1 | mRNA | upstream | 94144 | 2542942 ~ 2549897 (+) | True | LOC113532859 |
| XM_034297895.1 | mRNA | downstream | 902 | 2648485 ~ 2654376 (+) | False | slc25a32b |
| XM_026924446.2 | mRNA | downstream | 592859 | 3240442 ~ 3251360 (+) | False | pbx2 |
| XM_026924447.2 | mRNA | downstream | 592859 | 3240442 ~ 3251360 (+) | False | pbx2 |
| XM_026924444.2 | mRNA | downstream | 592861 | 3240444 ~ 3251360 (+) | True | pbx2 |
| XM_034298007.1 | mRNA | downstream | 592861 | 3240444 ~ 3251360 (+) | False | pbx2 |
| TU385671 | other | upstream | 74302 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403389.2 | other | upstream | 429742 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 429780 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 499530 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU384187 | other | upstream | 1480427 | 1118268 ~ 1163614 (+) | True | G324258 |
| TU386582 | other | downstream | 1363827 | 4011410 ~ 4013538 (+) | False | hamp |
| TU386810 | other | downstream | 2273397 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 2277203 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 2684685 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 5254209 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
