Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU386074 |
| length | 601 |
| lncRNA type | read_through |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G325780 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 3209206 ~ 3237328 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU386073 | lncRNA | downstream | 7956 | 3199227 ~ 3201250 (-) | True | G325779 |
| TU385878 | lncRNA | downstream | 610627 | 2597279 ~ 2598579 (-) | True | G325616 |
| TU385609 | lncRNA | downstream | 808616 | 2400317 ~ 2400590 (-) | True | G325373 |
| TU385602 | lncRNA | downstream | 821648 | 2387309 ~ 2387558 (-) | True | G325366 |
| TU385578 | lncRNA | downstream | 836404 | 2348305 ~ 2372802 (-) | True | G325343 |
| TU386121 | lncRNA | upstream | 82487 | 3319815 ~ 3320248 (-) | False | LOC113532799 |
| TU386120 | lncRNA | upstream | 82587 | 3319915 ~ 3322362 (-) | False | LOC113532799 |
| TU386393 | lncRNA | upstream | 483361 | 3720689 ~ 3796359 (-) | False | znf385d |
| TU386460 | lncRNA | upstream | 584577 | 3821905 ~ 3878517 (-) | True | G326133 |
| XR_004576980.1 | lncRNA | upstream | 636595 | 3873923 ~ 3881884 (-) | False | LOC113532993 |
| XM_026924865.2 | mRNA | downstream | 58455 | 3141067 ~ 3150751 (-) | True | rad21a |
| XM_026923962.2 | mRNA | downstream | 69107 | 3111442 ~ 3140099 (-) | True | eif3ha |
| XM_034297833.1 | mRNA | downstream | 163319 | 3036394 ~ 3045887 (-) | True | LOC117595760 |
| XM_026924403.2 | mRNA | downstream | 290312 | 2680337 ~ 2918894 (-) | True | csmd3a |
| XM_026924873.2 | mRNA | downstream | 540997 | 2656902 ~ 2668209 (-) | True | cthrc1b |
| XM_026924864.2 | mRNA | upstream | 15365 | 3252693 ~ 3262914 (-) | True | notchl |
| XM_026924438.2 | mRNA | upstream | 82216 | 3319544 ~ 3404418 (-) | False | LOC113532799 |
| XM_026924437.2 | mRNA | upstream | 82216 | 3319544 ~ 3404418 (-) | True | LOC113532799 |
| XM_034298123.1 | mRNA | upstream | 379267 | 3616595 ~ 3672133 (-) | False | LOC113532763 |
| XM_034298124.1 | mRNA | upstream | 379267 | 3616595 ~ 3670287 (-) | False | LOC113532763 |
| TU385328 | other | downstream | 1111771 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU384835 | other | downstream | 1758490 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU384829 | other | downstream | 1838177 | 1370476 ~ 1371029 (-) | True | G324748 |
| XR_004576952.1 | other | downstream | 2107089 | 1047583 ~ 1102117 (-) | True | nek11 |
| TU384611 | other | downstream | 2481572 | 726627 ~ 727634 (-) | True | G324579 |
| TU386070 | other | upstream | 373 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
| TU387191 | other | upstream | 1726289 | 4963617 ~ 4977453 (-) | False | ubr5 |
| TU387192 | other | upstream | 1726289 | 4963617 ~ 4977527 (-) | False | ubr5 |
| XR_003403372.2 | other | upstream | 2592146 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| TU388042 | other | upstream | 2638768 | 5876096 ~ 5978268 (-) | False | zfpm2a |
