Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU386457 |
| length | 265 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G326131 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 3880677 ~ 3880941 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU386344 | lncRNA | upstream | 178524 | 3701334 ~ 3702153 (+) | True | G326023 |
| TU386119 | lncRNA | upstream | 558347 | 3319917 ~ 3322330 (+) | True | G325815 |
| TU386041 | lncRNA | upstream | 620496 | 3258929 ~ 3260181 (+) | True | G325754 |
| TU386009 | lncRNA | upstream | 671715 | 3139312 ~ 3208962 (+) | True | G325730 |
| TU385973 | lncRNA | upstream | 808604 | 3071849 ~ 3072073 (+) | True | G325697 |
| TU386508 | lncRNA | downstream | 64441 | 3945382 ~ 3946133 (+) | True | G326178 |
| TU386524 | lncRNA | downstream | 86591 | 3967532 ~ 3973002 (+) | True | G326193 |
| TU386648 | lncRNA | downstream | 438274 | 4319215 ~ 4359118 (+) | True | G326288 |
| TU386632 | lncRNA | downstream | 467840 | 4348781 ~ 4351847 (+) | True | G326281 |
| TU386679 | lncRNA | downstream | 510643 | 4391584 ~ 4394784 (+) | False | hmgn2 |
| XM_026924761.2 | mRNA | upstream | 2153 | 3849062 ~ 3878524 (+) | True | ube2e2 |
| XM_026924357.2 | mRNA | upstream | 157908 | 3714016 ~ 3722769 (+) | True | rab5ab |
| XM_026924356.2 | mRNA | upstream | 157908 | 3714016 ~ 3722769 (+) | False | rab5ab |
| XM_026924247.2 | mRNA | upstream | 410465 | 3425575 ~ 3470212 (+) | True | LOC113532711 |
| XM_026924434.2 | mRNA | upstream | 457683 | 3365121 ~ 3422994 (+) | True | LOC113532798 |
| XM_026924488.2 | mRNA | downstream | 1030 | 3881971 ~ 3891903 (+) | True | nr1d2a |
| XM_026924020.2 | mRNA | downstream | 36474 | 3917415 ~ 3935176 (+) | False | LOC113532591 |
| XM_034298268.1 | mRNA | downstream | 36476 | 3917417 ~ 3935176 (+) | False | LOC113532591 |
| XM_034298267.1 | mRNA | downstream | 37074 | 3918015 ~ 3935176 (+) | False | LOC113532591 |
| XM_034298266.1 | mRNA | downstream | 37133 | 3918074 ~ 3935176 (+) | True | LOC113532591 |
| TU385671 | other | upstream | 1310938 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403389.2 | other | upstream | 1666378 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 1666416 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 1736166 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU384187 | other | upstream | 2717063 | 1118268 ~ 1163614 (+) | True | G324258 |
| TU386582 | other | downstream | 130469 | 4011410 ~ 4013538 (+) | False | hamp |
| TU386810 | other | downstream | 1040039 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 1043845 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 1451327 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 4020851 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
