Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU386508 |
| length | 670 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G326178 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 3945382 ~ 3946133 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU386457 | lncRNA | upstream | 64441 | 3880677 ~ 3880941 (+) | True | G326131 |
| TU386344 | lncRNA | upstream | 243229 | 3701334 ~ 3702153 (+) | True | G326023 |
| TU386119 | lncRNA | upstream | 623052 | 3319917 ~ 3322330 (+) | True | G325815 |
| TU386041 | lncRNA | upstream | 685201 | 3258929 ~ 3260181 (+) | True | G325754 |
| TU386009 | lncRNA | upstream | 736420 | 3139312 ~ 3208962 (+) | True | G325730 |
| TU386524 | lncRNA | downstream | 21399 | 3967532 ~ 3973002 (+) | True | G326193 |
| TU386648 | lncRNA | downstream | 373082 | 4319215 ~ 4359118 (+) | True | G326288 |
| TU386632 | lncRNA | downstream | 402648 | 4348781 ~ 4351847 (+) | True | G326281 |
| TU386679 | lncRNA | downstream | 445451 | 4391584 ~ 4394784 (+) | False | hmgn2 |
| TU386681 | lncRNA | downstream | 452545 | 4398678 ~ 4406561 (+) | False | LOC113532991 |
| XM_026924031.2 | mRNA | upstream | 152 | 3940385 ~ 3945230 (+) | True | LOC113532597 |
| XM_026924032.2 | mRNA | upstream | 5355 | 3935562 ~ 3940027 (+) | True | LOC113532598 |
| XM_026924020.2 | mRNA | upstream | 10206 | 3917415 ~ 3935176 (+) | False | LOC113532591 |
| XM_034298268.1 | mRNA | upstream | 10206 | 3917417 ~ 3935176 (+) | False | LOC113532591 |
| XM_034298267.1 | mRNA | upstream | 10206 | 3918015 ~ 3935176 (+) | False | LOC113532591 |
| XM_026924054.2 | mRNA | downstream | 34295 | 3980428 ~ 4002436 (+) | False | LOC113532613 |
| XM_026924053.2 | mRNA | downstream | 34297 | 3980430 ~ 4002436 (+) | True | LOC113532613 |
| XM_026924670.2 | mRNA | downstream | 65247 | 4011380 ~ 4013531 (+) | True | hamp |
| XM_026924409.2 | mRNA | downstream | 123923 | 4070056 ~ 4206519 (+) | True | iglon5 |
| XM_034297819.1 | mRNA | downstream | 337155 | 4283288 ~ 4288230 (+) | False | LOC113532664 |
| TU385671 | other | upstream | 1375643 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403389.2 | other | upstream | 1731083 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 1731121 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 1800871 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU384187 | other | upstream | 2781768 | 1118268 ~ 1163614 (+) | True | G324258 |
| TU386582 | other | downstream | 65277 | 4011410 ~ 4013538 (+) | False | hamp |
| TU386810 | other | downstream | 974847 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 978653 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 1386135 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 3955659 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
