Item | Value |
---|---|
RNA id | XM_034298292.1 |
length | 3668 |
RNA type | mRNA |
GC content | 0.43 |
exon number | 7 |
gene id | LOC113532991 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 4398659 ~ 4434251 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU386679 | lncRNA | upstream | 3882 | 4391584 ~ 4394784 (+) | False | hmgn2 |
TU386648 | lncRNA | upstream | 39548 | 4319215 ~ 4359118 (+) | True | G326288 |
TU386632 | lncRNA | upstream | 46819 | 4348781 ~ 4351847 (+) | True | G326281 |
TU386524 | lncRNA | upstream | 425664 | 3967532 ~ 3973002 (+) | True | G326193 |
TU386508 | lncRNA | upstream | 452533 | 3945382 ~ 3946133 (+) | True | G326178 |
XR_004576935.1 | lncRNA | downstream | 32257 | 4466508 ~ 4468850 (+) | True | LOC117595758 |
TU386730 | lncRNA | downstream | 108176 | 4542427 ~ 4542695 (+) | True | G326359 |
TU386740 | lncRNA | downstream | 145299 | 4579550 ~ 4587322 (+) | True | G326369 |
TU386745 | lncRNA | downstream | 214774 | 4649025 ~ 4656515 (+) | True | G326374 |
XR_003403355.2 | lncRNA | downstream | 366321 | 4800572 ~ 4803511 (+) | True | LOC113532560 |
XM_026923895.2 | mRNA | upstream | 3882 | 4391520 ~ 4394784 (+) | True | hmgn2 |
XM_026923894.2 | mRNA | upstream | 3888 | 4391529 ~ 4394778 (+) | False | hmgn2 |
XM_034298281.1 | mRNA | upstream | 9205 | 4378023 ~ 4389461 (+) | True | dhdds |
XM_026924919.2 | mRNA | upstream | 95136 | 4294369 ~ 4303530 (+) | False | si:dkeyp-97a10.2 |
XM_026924920.2 | mRNA | upstream | 95137 | 4294370 ~ 4303529 (+) | True | si:dkeyp-97a10.2 |
XM_026924511.2 | mRNA | downstream | 67236 | 4501487 ~ 4545347 (+) | True | slc9a1a |
XM_026924220.2 | mRNA | downstream | 121874 | 4556125 ~ 4770616 (+) | False | LOC113532696 |
XM_026924218.2 | mRNA | downstream | 127005 | 4561256 ~ 4770616 (+) | True | LOC113532696 |
XM_026923880.2 | mRNA | downstream | 408208 | 4842459 ~ 4856152 (+) | True | ifnlr1 |
XM_026924871.2 | mRNA | downstream | 430318 | 4864569 ~ 4918469 (+) | True | myom3 |
TU386582 | other | upstream | 385128 | 4011410 ~ 4013538 (+) | False | hamp |
TU385671 | other | upstream | 1828927 | 2565700 ~ 2569739 (+) | False | G325435 |
XR_003403389.2 | other | upstream | 2184367 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
XR_003403390.2 | other | upstream | 2184405 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
TU385279 | other | upstream | 2254155 | 2142506 ~ 2144511 (+) | False | bola1 |
TU386810 | other | downstream | 486729 | 4920980 ~ 4923681 (+) | True | fabp10a |
TU386814 | other | downstream | 490535 | 4924786 ~ 4930154 (+) | True | srsf10a |
TU387482 | other | downstream | 898017 | 5332268 ~ 5338251 (+) | True | G326997 |
TU389428 | other | downstream | 3467541 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
XR_004576973.1 | other | downstream | 3953936 | 8388187 ~ 8484833 (+) | False | LOC113532774 |