Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU386730 |
| length | 204 |
| lncRNA type | intronic |
| GC content | 0.29 |
| exon number | 2 |
| gene id | G326359 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 4542427 ~ 4542695 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576935.1 | lncRNA | upstream | 73577 | 4466508 ~ 4468850 (+) | True | LOC117595758 |
| TU386681 | lncRNA | upstream | 135866 | 4398678 ~ 4406561 (+) | False | LOC113532991 |
| TU386679 | lncRNA | upstream | 147643 | 4391584 ~ 4394784 (+) | False | hmgn2 |
| TU386648 | lncRNA | upstream | 183309 | 4319215 ~ 4359118 (+) | True | G326288 |
| TU386632 | lncRNA | upstream | 190580 | 4348781 ~ 4351847 (+) | True | G326281 |
| TU386740 | lncRNA | downstream | 36855 | 4579550 ~ 4587322 (+) | True | G326369 |
| TU386745 | lncRNA | downstream | 106330 | 4649025 ~ 4656515 (+) | True | G326374 |
| XR_003403355.2 | lncRNA | downstream | 257877 | 4800572 ~ 4803511 (+) | True | LOC113532560 |
| TU386800 | lncRNA | downstream | 261142 | 4803837 ~ 4804059 (+) | True | G326429 |
| TU386812 | lncRNA | downstream | 381483 | 4924178 ~ 4924636 (+) | True | G326440 |
| XM_034298293.1 | mRNA | upstream | 108176 | 4398659 ~ 4434251 (+) | False | LOC113532991 |
| XM_034298292.1 | mRNA | upstream | 108176 | 4398666 ~ 4434251 (+) | True | LOC113532991 |
| XM_026924760.2 | mRNA | upstream | 108176 | 4426586 ~ 4434251 (+) | False | LOC113532991 |
| XM_034298294.1 | mRNA | upstream | 108176 | 4430161 ~ 4434251 (+) | False | LOC113532991 |
| XM_026923894.2 | mRNA | upstream | 147649 | 4391529 ~ 4394778 (+) | False | hmgn2 |
| XM_026924220.2 | mRNA | downstream | 13430 | 4556125 ~ 4770616 (+) | False | LOC113532696 |
| XM_026924218.2 | mRNA | downstream | 18561 | 4561256 ~ 4770616 (+) | True | LOC113532696 |
| XM_026923880.2 | mRNA | downstream | 299764 | 4842459 ~ 4856152 (+) | True | ifnlr1 |
| XM_026924871.2 | mRNA | downstream | 321874 | 4864569 ~ 4918469 (+) | True | myom3 |
| XM_026924089.2 | mRNA | downstream | 378478 | 4921173 ~ 4923671 (+) | False | fabp10a |
| TU386582 | other | upstream | 528889 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 1972688 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403389.2 | other | upstream | 2328128 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 2328166 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 2397916 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU386810 | other | downstream | 378285 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 382091 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 789573 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 3359097 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 3845492 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
