Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU386800 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G326429 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 4803837 ~ 4804059 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403355.2 | lncRNA | upstream | 326 | 4800572 ~ 4803511 (+) | True | LOC113532560 |
| TU386745 | lncRNA | upstream | 147322 | 4649025 ~ 4656515 (+) | True | G326374 |
| TU386740 | lncRNA | upstream | 216515 | 4579550 ~ 4587322 (+) | True | G326369 |
| TU386730 | lncRNA | upstream | 261142 | 4542427 ~ 4542695 (+) | True | G326359 |
| XR_004576935.1 | lncRNA | upstream | 334987 | 4466508 ~ 4468850 (+) | True | LOC117595758 |
| TU386812 | lncRNA | downstream | 120119 | 4924178 ~ 4924636 (+) | True | G326440 |
| TU386834 | lncRNA | downstream | 179414 | 4983473 ~ 4983680 (+) | True | G326458 |
| TU386818 | lncRNA | downstream | 181431 | 4985490 ~ 4989316 (+) | False | klf10 |
| TU386838 | lncRNA | downstream | 215723 | 5019782 ~ 5029790 (+) | True | G326462 |
| TU387473 | lncRNA | downstream | 507172 | 5311231 ~ 5314589 (+) | False | acbd7 |
| XM_026924220.2 | mRNA | upstream | 33221 | 4556125 ~ 4770616 (+) | False | LOC113532696 |
| XM_026924218.2 | mRNA | upstream | 33221 | 4561256 ~ 4770616 (+) | True | LOC113532696 |
| XM_026924511.2 | mRNA | upstream | 258490 | 4501487 ~ 4545347 (+) | True | slc9a1a |
| XM_026924760.2 | mRNA | upstream | 369586 | 4426586 ~ 4434251 (+) | False | LOC113532991 |
| XM_026923880.2 | mRNA | downstream | 38400 | 4842459 ~ 4856152 (+) | True | ifnlr1 |
| XM_026924871.2 | mRNA | downstream | 60510 | 4864569 ~ 4918469 (+) | True | myom3 |
| XM_026924089.2 | mRNA | downstream | 117114 | 4921173 ~ 4923671 (+) | False | fabp10a |
| XM_026924600.2 | mRNA | downstream | 120722 | 4924781 ~ 4930155 (+) | False | srsf10a |
| XM_026924263.2 | mRNA | downstream | 180356 | 4984415 ~ 4988847 (+) | True | klf10 |
| TU386582 | other | upstream | 790299 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 2234098 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403389.2 | other | upstream | 2589538 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| XR_003403390.2 | other | upstream | 2589576 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU385279 | other | upstream | 2659326 | 2142506 ~ 2144511 (+) | False | bola1 |
| TU386810 | other | downstream | 116921 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386814 | other | downstream | 120727 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU387482 | other | downstream | 528209 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 3097733 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 3584128 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
