Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU386834 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G326458 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 4983473 ~ 4983680 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU386812 | lncRNA | upstream | 58837 | 4924178 ~ 4924636 (+) | True | G326440 |
| TU386800 | lncRNA | upstream | 179414 | 4803837 ~ 4804059 (+) | True | G326429 |
| XR_003403355.2 | lncRNA | upstream | 179962 | 4800572 ~ 4803511 (+) | True | LOC113532560 |
| TU386745 | lncRNA | upstream | 326958 | 4649025 ~ 4656515 (+) | True | G326374 |
| TU386740 | lncRNA | upstream | 396151 | 4579550 ~ 4587322 (+) | True | G326369 |
| TU386818 | lncRNA | downstream | 1810 | 4985490 ~ 4989316 (+) | False | klf10 |
| TU386838 | lncRNA | downstream | 36102 | 5019782 ~ 5029790 (+) | True | G326462 |
| TU387473 | lncRNA | downstream | 327551 | 5311231 ~ 5314589 (+) | False | acbd7 |
| TU387573 | lncRNA | downstream | 557678 | 5541358 ~ 5541889 (+) | True | G327071 |
| TU387696 | lncRNA | downstream | 622190 | 5605870 ~ 5607099 (+) | True | G327178 |
| XM_026924600.2 | mRNA | upstream | 53318 | 4924781 ~ 4930155 (+) | False | srsf10a |
| XM_026924089.2 | mRNA | upstream | 59802 | 4921173 ~ 4923671 (+) | False | fabp10a |
| XM_026924871.2 | mRNA | upstream | 65004 | 4864569 ~ 4918469 (+) | True | myom3 |
| XM_026923880.2 | mRNA | upstream | 127321 | 4842459 ~ 4856152 (+) | True | ifnlr1 |
| XM_026924220.2 | mRNA | upstream | 212857 | 4556125 ~ 4770616 (+) | False | LOC113532696 |
| XM_026924263.2 | mRNA | downstream | 735 | 4984415 ~ 4988847 (+) | True | klf10 |
| XM_026924264.2 | mRNA | downstream | 736 | 4984416 ~ 4988847 (+) | False | klf10 |
| XM_034297979.1 | mRNA | downstream | 24864 | 5008544 ~ 5019097 (+) | True | atp6v1c1a |
| XM_034297834.1 | mRNA | downstream | 63286 | 5046966 ~ 5056667 (+) | True | cep72 |
| XM_026924631.2 | mRNA | downstream | 113461 | 5097141 ~ 5105422 (+) | True | trip13 |
| TU386814 | other | upstream | 53319 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 59792 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 969935 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 2413734 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403389.2 | other | upstream | 2769174 | 2210222 ~ 2214299 (+) | False | LOC113533074 |
| TU387482 | other | downstream | 348588 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 2918112 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 3404507 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 3631393 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 3785065 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
