Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387411 |
| length | 251 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G326945 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5198223 ~ 5199406 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU387406 | lncRNA | downstream | 17206 | 5180816 ~ 5181017 (-) | True | G326940 |
| TU387308 | lncRNA | downstream | 92257 | 5104832 ~ 5105966 (-) | True | G326875 |
| TU387253 | lncRNA | downstream | 229676 | 4967298 ~ 4968547 (-) | True | G326830 |
| TU387029 | lncRNA | downstream | 695622 | 4501589 ~ 4502601 (-) | True | G326630 |
| XR_003403377.2 | lncRNA | downstream | 786822 | 4408491 ~ 4411401 (-) | True | LOC113532978 |
| TU387426 | lncRNA | upstream | 56389 | 5255795 ~ 5256011 (-) | True | G326958 |
| TU387428 | lncRNA | upstream | 57645 | 5257051 ~ 5257276 (-) | True | G326960 |
| TU387455 | lncRNA | upstream | 95326 | 5294732 ~ 5295232 (-) | True | G326981 |
| TU387472 | lncRNA | upstream | 110643 | 5310049 ~ 5310265 (-) | True | G326989 |
| TU387478 | lncRNA | upstream | 114801 | 5314207 ~ 5314655 (-) | True | G326995 |
| XM_034297836.1 | mRNA | downstream | 19205 | 5178282 ~ 5179018 (-) | True | LOC117595762 |
| XM_034297835.1 | mRNA | downstream | 29597 | 5167096 ~ 5168626 (-) | True | LOC117595761 |
| XM_026924938.2 | mRNA | downstream | 101039 | 5085898 ~ 5097184 (-) | False | brd9 |
| XM_026924952.2 | mRNA | upstream | 6155 | 5205561 ~ 5216300 (-) | True | si:dkey-65b12.6 |
| XM_034298072.1 | mRNA | upstream | 108035 | 5307441 ~ 5309104 (-) | False | rpp38 |
| XM_026924203.2 | mRNA | upstream | 108035 | 5307441 ~ 5309104 (-) | True | rpp38 |
| XM_026924200.2 | mRNA | upstream | 132723 | 5332129 ~ 5349833 (-) | True | abcb4 |
| XM_026924201.2 | mRNA | upstream | 132723 | 5332129 ~ 5345883 (-) | False | abcb4 |
| TU387192 | other | downstream | 220696 | 4963617 ~ 4977527 (-) | False | ubr5 |
| TU387191 | other | downstream | 220770 | 4963617 ~ 4977453 (-) | False | ubr5 |
| TU386070 | other | downstream | 1959076 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
| TU385328 | other | downstream | 3100788 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU384835 | other | downstream | 3747507 | 1429932 ~ 1450716 (-) | False | kif13a |
| XR_003403372.2 | other | upstream | 630068 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| TU388042 | other | upstream | 676690 | 5876096 ~ 5978268 (-) | False | zfpm2a |
| trnam-cau_47 | other | upstream | 1230454 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| TU388974 | other | upstream | 1857388 | 7056794 ~ 7062428 (-) | True | G328342 |
| TU389089 | other | upstream | 2179374 | 7378780 ~ 7386306 (-) | False | sec61b |
