Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387473 |
| length | 544 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 4 |
| gene id | acbd7 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5311209 ~ 5314614 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU386838 | lncRNA | upstream | 281441 | 5019782 ~ 5029790 (+) | True | G326462 |
| TU386818 | lncRNA | upstream | 321915 | 4985490 ~ 4989316 (+) | False | klf10 |
| TU386834 | lncRNA | upstream | 327551 | 4983473 ~ 4983680 (+) | True | G326458 |
| TU386812 | lncRNA | upstream | 386595 | 4924178 ~ 4924636 (+) | True | G326440 |
| TU386800 | lncRNA | upstream | 507172 | 4803837 ~ 4804059 (+) | True | G326429 |
| TU387573 | lncRNA | downstream | 226769 | 5541358 ~ 5541889 (+) | True | G327071 |
| TU387696 | lncRNA | downstream | 291281 | 5605870 ~ 5607099 (+) | True | G327178 |
| TU387921 | lncRNA | downstream | 518404 | 5832993 ~ 5833262 (+) | True | G327385 |
| TU387927 | lncRNA | downstream | 527630 | 5842219 ~ 5842438 (+) | True | G327391 |
| TU388624 | lncRNA | downstream | 1333691 | 6648280 ~ 6708779 (+) | True | G328024 |
| XM_026924202.2 | mRNA | upstream | 4092 | 5298302 ~ 5307139 (+) | True | nmt2 |
| XM_026924452.2 | mRNA | upstream | 16488 | 5260438 ~ 5294743 (+) | True | fam171a1 |
| XM_026924393.2 | mRNA | upstream | 52672 | 5254686 ~ 5258559 (+) | True | LOC113532775 |
| XM_034298250.1 | mRNA | upstream | 56679 | 5248910 ~ 5254552 (+) | False | LOC113532776 |
| XM_026924395.2 | mRNA | upstream | 56679 | 5248913 ~ 5254552 (+) | False | LOC113532776 |
| XM_034298071.1 | mRNA | downstream | 2609 | 5317198 ~ 5331214 (+) | True | crot |
| XM_026923889.2 | mRNA | downstream | 41593 | 5356182 ~ 5386626 (+) | False | rundc3b |
| XM_026923887.2 | mRNA | downstream | 41595 | 5356184 ~ 5386626 (+) | True | rundc3b |
| XM_026923890.2 | mRNA | downstream | 41595 | 5356184 ~ 5386626 (+) | False | rundc3b |
| XM_026923888.2 | mRNA | downstream | 41598 | 5356187 ~ 5386626 (+) | False | rundc3b |
| TU386814 | other | upstream | 381077 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 387550 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 1297693 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 2741492 | 2565700 ~ 2569739 (+) | False | G325435 |
| XR_003403390.2 | other | upstream | 3096970 | 2210222 ~ 2214261 (+) | False | LOC113533074 |
| TU387482 | other | downstream | 17679 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU389428 | other | downstream | 2587203 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 3073598 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 3300484 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 3454156 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
