Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387573 |
| length | 375 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G327071 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5541358 ~ 5541889 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU387473 | lncRNA | upstream | 226769 | 5311231 ~ 5314589 (+) | False | acbd7 |
| TU386838 | lncRNA | upstream | 511568 | 5019782 ~ 5029790 (+) | True | G326462 |
| TU386818 | lncRNA | upstream | 552042 | 4985490 ~ 4989316 (+) | False | klf10 |
| TU386834 | lncRNA | upstream | 557678 | 4983473 ~ 4983680 (+) | True | G326458 |
| TU386812 | lncRNA | upstream | 616722 | 4924178 ~ 4924636 (+) | True | G326440 |
| TU387696 | lncRNA | downstream | 63981 | 5605870 ~ 5607099 (+) | True | G327178 |
| TU387921 | lncRNA | downstream | 291104 | 5832993 ~ 5833262 (+) | True | G327385 |
| TU387927 | lncRNA | downstream | 300330 | 5842219 ~ 5842438 (+) | True | G327391 |
| TU388624 | lncRNA | downstream | 1106391 | 6648280 ~ 6708779 (+) | True | G328024 |
| TU388766 | lncRNA | downstream | 1407670 | 6949559 ~ 6961376 (+) | True | G328161 |
| XM_026924170.2 | mRNA | upstream | 48619 | 5415932 ~ 5492739 (+) | True | adam22 |
| XM_026924167.2 | mRNA | upstream | 48619 | 5415934 ~ 5492739 (+) | False | adam22 |
| XM_026924168.2 | mRNA | upstream | 48619 | 5415935 ~ 5492739 (+) | False | adam22 |
| XM_026924169.2 | mRNA | upstream | 55890 | 5415934 ~ 5485468 (+) | False | adam22 |
| XM_026924768.2 | mRNA | upstream | 130308 | 5400933 ~ 5411050 (+) | False | dbf4 |
| XM_026924674.2 | mRNA | downstream | 4662 | 5546551 ~ 5547833 (+) | True | mrpl32 |
| XM_026923952.2 | mRNA | downstream | 8336 | 5550225 ~ 5553304 (+) | True | ccdc127a |
| XM_026923902.2 | mRNA | downstream | 23757 | 5565646 ~ 5583027 (+) | True | rnf144b |
| XM_026924003.2 | mRNA | downstream | 42527 | 5584416 ~ 5591733 (+) | True | LOC113532582 |
| XM_034297883.1 | mRNA | downstream | 42998 | 5584887 ~ 5591733 (+) | False | LOC113532582 |
| TU387482 | other | upstream | 203107 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU386814 | other | upstream | 611204 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 617677 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 1527820 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 2971619 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU389428 | other | downstream | 2359903 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 2846298 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 3073184 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 3226856 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| XR_004576948.1 | other | downstream | 3226857 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
