Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387921 |
| length | 270 |
| lncRNA type | intronic |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G327385 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5832993 ~ 5833262 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU387696 | lncRNA | upstream | 225894 | 5605870 ~ 5607099 (+) | True | G327178 |
| TU387573 | lncRNA | upstream | 291104 | 5541358 ~ 5541889 (+) | True | G327071 |
| TU387473 | lncRNA | upstream | 518404 | 5311231 ~ 5314589 (+) | False | acbd7 |
| TU386838 | lncRNA | upstream | 803203 | 5019782 ~ 5029790 (+) | True | G326462 |
| TU386818 | lncRNA | upstream | 843677 | 4985490 ~ 4989316 (+) | False | klf10 |
| TU387927 | lncRNA | downstream | 8957 | 5842219 ~ 5842438 (+) | True | G327391 |
| TU388624 | lncRNA | downstream | 815018 | 6648280 ~ 6708779 (+) | True | G328024 |
| TU388766 | lncRNA | downstream | 1116297 | 6949559 ~ 6961376 (+) | True | G328161 |
| TU388815 | lncRNA | downstream | 1189893 | 7023155 ~ 7029401 (+) | True | G328208 |
| TU388835 | lncRNA | downstream | 1211784 | 7045046 ~ 7045278 (+) | True | G328222 |
| XM_034298143.1 | mRNA | upstream | 2933 | 5796162 ~ 5830060 (+) | False | si:dkey-122a22.2 |
| XM_026924619.2 | mRNA | upstream | 3667 | 5796162 ~ 5829326 (+) | False | si:dkey-122a22.2 |
| XM_026924676.2 | mRNA | upstream | 229980 | 5593849 ~ 5603013 (+) | True | sqlea |
| XM_026924003.2 | mRNA | upstream | 241260 | 5584416 ~ 5591733 (+) | True | LOC113532582 |
| XM_034297883.1 | mRNA | upstream | 241260 | 5584887 ~ 5591733 (+) | False | LOC113532582 |
| XM_026924312.2 | mRNA | downstream | 232871 | 6066133 ~ 6084254 (+) | True | dpys |
| XM_034298203.1 | mRNA | downstream | 471319 | 6304581 ~ 6312558 (+) | True | zgc:101716 |
| XM_026924697.2 | mRNA | downstream | 485825 | 6319087 ~ 6326360 (+) | True | upk1a |
| XM_026924097.2 | mRNA | downstream | 821513 | 6654775 ~ 6759822 (+) | True | LOC113532640 |
| XM_026924098.2 | mRNA | downstream | 821513 | 6654775 ~ 6759822 (+) | False | LOC113532640 |
| TU387482 | other | upstream | 494742 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU386814 | other | upstream | 902839 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 909312 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 1819455 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 3263254 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU389428 | other | downstream | 2068530 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 2554925 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 2781811 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 2935483 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| XR_004576948.1 | other | downstream | 2935484 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
