Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU387927 |
| length | 220 |
| lncRNA type | intronic |
| GC content | 0.64 |
| exon number | 1 |
| gene id | G327391 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5842219 ~ 5842438 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU387921 | lncRNA | upstream | 8957 | 5832993 ~ 5833262 (+) | True | G327385 |
| TU387696 | lncRNA | upstream | 235120 | 5605870 ~ 5607099 (+) | True | G327178 |
| TU387573 | lncRNA | upstream | 300330 | 5541358 ~ 5541889 (+) | True | G327071 |
| TU387473 | lncRNA | upstream | 527630 | 5311231 ~ 5314589 (+) | False | acbd7 |
| TU386838 | lncRNA | upstream | 812429 | 5019782 ~ 5029790 (+) | True | G326462 |
| TU388624 | lncRNA | downstream | 805842 | 6648280 ~ 6708779 (+) | True | G328024 |
| TU388766 | lncRNA | downstream | 1107121 | 6949559 ~ 6961376 (+) | True | G328161 |
| TU388815 | lncRNA | downstream | 1180717 | 7023155 ~ 7029401 (+) | True | G328208 |
| TU388835 | lncRNA | downstream | 1202608 | 7045046 ~ 7045278 (+) | True | G328222 |
| TU388878 | lncRNA | downstream | 1285728 | 7128166 ~ 7136722 (+) | True | G328260 |
| XM_026924620.2 | mRNA | upstream | 3889 | 5796162 ~ 5838330 (+) | True | si:dkey-122a22.2 |
| XM_034298143.1 | mRNA | upstream | 12159 | 5796162 ~ 5830060 (+) | False | si:dkey-122a22.2 |
| XM_026924619.2 | mRNA | upstream | 12893 | 5796162 ~ 5829326 (+) | False | si:dkey-122a22.2 |
| XM_026924676.2 | mRNA | upstream | 239206 | 5593849 ~ 5603013 (+) | True | sqlea |
| XM_026924003.2 | mRNA | upstream | 250486 | 5584416 ~ 5591733 (+) | True | LOC113532582 |
| XM_026924312.2 | mRNA | downstream | 223695 | 6066133 ~ 6084254 (+) | True | dpys |
| XM_034298203.1 | mRNA | downstream | 462143 | 6304581 ~ 6312558 (+) | True | zgc:101716 |
| XM_026924697.2 | mRNA | downstream | 476649 | 6319087 ~ 6326360 (+) | True | upk1a |
| XM_026924097.2 | mRNA | downstream | 812337 | 6654775 ~ 6759822 (+) | True | LOC113532640 |
| XM_026924098.2 | mRNA | downstream | 812337 | 6654775 ~ 6759822 (+) | False | LOC113532640 |
| TU387482 | other | upstream | 503968 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU386814 | other | upstream | 912065 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 918538 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 1828681 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 3272480 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU389428 | other | downstream | 2059354 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 2545749 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 2772635 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 2926307 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| XR_004576948.1 | other | downstream | 2926308 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
