Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU388042 |
| length | 706 |
| RNA type | TUCP |
| GC content | 0.55 |
| exon number | 5 |
| gene id | zfpm2a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5829474 ~ 5978379 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU388047 | lncRNA | downstream | 37819 | 5837883 ~ 5838277 (-) | True | G327508 |
| TU388046 | lncRNA | downstream | 38314 | 5837489 ~ 5837782 (-) | True | G327507 |
| TU388044 | lncRNA | downstream | 39790 | 5836070 ~ 5836306 (-) | True | G327505 |
| TU387897 | lncRNA | downstream | 136508 | 5738537 ~ 5739588 (-) | True | G327362 |
| TU387604 | lncRNA | downstream | 482514 | 5392222 ~ 5393582 (-) | True | G327100 |
| TU388102 | lncRNA | upstream | 105098 | 6083366 ~ 6084649 (-) | True | G327560 |
| TU388498 | lncRNA | upstream | 278135 | 6256403 ~ 6331285 (-) | False | arhgap33 |
| TU388686 | lncRNA | upstream | 670028 | 6648296 ~ 6708767 (-) | True | G328083 |
| TU388687 | lncRNA | upstream | 670028 | 6648296 ~ 6741046 (-) | False | G328083 |
| TU388824 | lncRNA | upstream | 1053096 | 7031364 ~ 7032724 (-) | True | G328215 |
| XM_026924618.2 | mRNA | downstream | 21544 | 5829474 ~ 5854552 (-) | False | zfpm2a |
| XM_026924547.2 | mRNA | downstream | 96703 | 5603689 ~ 5779393 (-) | True | oxr1a |
| XM_026924549.2 | mRNA | downstream | 96703 | 5605292 ~ 5779393 (-) | False | oxr1a |
| XM_026924548.2 | mRNA | downstream | 214422 | 5605292 ~ 5661674 (-) | False | oxr1a |
| XM_034298284.1 | mRNA | downstream | 262783 | 5605292 ~ 5613313 (-) | False | oxr1a |
| XM_034298140.1 | mRNA | upstream | 107073 | 6085341 ~ 6087808 (-) | True | LOC113532744 |
| XM_034297918.1 | mRNA | upstream | 115763 | 6094031 ~ 6288364 (-) | False | rims2a |
| XM_034297915.1 | mRNA | upstream | 115763 | 6094031 ~ 6288364 (-) | False | rims2a |
| XM_034297900.1 | mRNA | upstream | 115763 | 6094031 ~ 6288364 (-) | False | rims2a |
| XM_034297906.1 | mRNA | upstream | 115763 | 6094031 ~ 6288364 (-) | False | rims2a |
| TU387192 | other | downstream | 898569 | 4963617 ~ 4977527 (-) | False | ubr5 |
| TU387191 | other | downstream | 898643 | 4963617 ~ 4977453 (-) | False | ubr5 |
| TU386070 | other | downstream | 2636949 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
| TU385328 | other | downstream | 3778661 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU384835 | other | downstream | 4425380 | 1429932 ~ 1450716 (-) | False | kif13a |
| trnam-cau_47 | other | upstream | 451592 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| TU388974 | other | upstream | 1078526 | 7056794 ~ 7062428 (-) | True | G328342 |
| TU389089 | other | upstream | 1400512 | 7378780 ~ 7386306 (-) | False | sec61b |
| XR_003404173.1 | other | upstream | 4306566 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 4544464 | 10522732 ~ 10523263 (-) | True | G330185 |
