Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU388046 |
| length | 294 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G327507 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 5837489 ~ 5837782 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU388044 | lncRNA | downstream | 1183 | 5836070 ~ 5836306 (-) | True | G327505 |
| TU387897 | lncRNA | downstream | 97901 | 5738537 ~ 5739588 (-) | True | G327362 |
| TU387604 | lncRNA | downstream | 443907 | 5392222 ~ 5393582 (-) | True | G327100 |
| TU387478 | lncRNA | downstream | 522834 | 5314207 ~ 5314655 (-) | True | G326995 |
| TU387472 | lncRNA | downstream | 527224 | 5310049 ~ 5310265 (-) | True | G326989 |
| TU388047 | lncRNA | upstream | 101 | 5837883 ~ 5838277 (-) | True | G327508 |
| TU388102 | lncRNA | upstream | 245584 | 6083366 ~ 6084649 (-) | True | G327560 |
| TU388498 | lncRNA | upstream | 418621 | 6256403 ~ 6331285 (-) | False | arhgap33 |
| TU388686 | lncRNA | upstream | 810514 | 6648296 ~ 6708767 (-) | True | G328083 |
| TU388687 | lncRNA | upstream | 810514 | 6648296 ~ 6741046 (-) | False | G328083 |
| XM_026924547.2 | mRNA | downstream | 58096 | 5603689 ~ 5779393 (-) | True | oxr1a |
| XM_026924549.2 | mRNA | downstream | 58096 | 5605292 ~ 5779393 (-) | False | oxr1a |
| XM_026924548.2 | mRNA | downstream | 175815 | 5605292 ~ 5661674 (-) | False | oxr1a |
| XM_034298284.1 | mRNA | downstream | 224176 | 5605292 ~ 5613313 (-) | False | oxr1a |
| XM_026924818.2 | mRNA | downstream | 275479 | 5554727 ~ 5562010 (-) | True | zmp:0000000930 |
| XM_034298140.1 | mRNA | upstream | 247559 | 6085341 ~ 6087808 (-) | True | LOC113532744 |
| XM_034297918.1 | mRNA | upstream | 256249 | 6094031 ~ 6288364 (-) | False | rims2a |
| XM_034297915.1 | mRNA | upstream | 256249 | 6094031 ~ 6288364 (-) | False | rims2a |
| XM_034297900.1 | mRNA | upstream | 256249 | 6094031 ~ 6288364 (-) | False | rims2a |
| XM_034297906.1 | mRNA | upstream | 256249 | 6094031 ~ 6288364 (-) | False | rims2a |
| TU387192 | other | downstream | 859962 | 4963617 ~ 4977527 (-) | False | ubr5 |
| TU387191 | other | downstream | 860036 | 4963617 ~ 4977453 (-) | False | ubr5 |
| TU386070 | other | downstream | 2598342 | 3237701 ~ 3239147 (-) | False | LOC113532533 |
| TU385328 | other | downstream | 3740054 | 2088259 ~ 2097435 (-) | True | G325145 |
| TU384835 | other | downstream | 4386773 | 1429932 ~ 1450716 (-) | False | kif13a |
| TU388042 | other | upstream | 38314 | 5876096 ~ 5978268 (-) | False | zfpm2a |
| trnam-cau_47 | other | upstream | 592078 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| TU388974 | other | upstream | 1219012 | 7056794 ~ 7062428 (-) | True | G328342 |
| TU389089 | other | upstream | 1540998 | 7378780 ~ 7386306 (-) | False | sec61b |
| XR_003404173.1 | other | upstream | 4447052 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
