Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU388766 |
| length | 339 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G328161 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 6949559 ~ 6961376 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU388624 | lncRNA | upstream | 240780 | 6648280 ~ 6708779 (+) | True | G328024 |
| TU387927 | lncRNA | upstream | 1107121 | 5842219 ~ 5842438 (+) | True | G327391 |
| TU387921 | lncRNA | upstream | 1116297 | 5832993 ~ 5833262 (+) | True | G327385 |
| TU387696 | lncRNA | upstream | 1342460 | 5605870 ~ 5607099 (+) | True | G327178 |
| TU387573 | lncRNA | upstream | 1407670 | 5541358 ~ 5541889 (+) | True | G327071 |
| TU388815 | lncRNA | downstream | 61779 | 7023155 ~ 7029401 (+) | True | G328208 |
| TU388835 | lncRNA | downstream | 83670 | 7045046 ~ 7045278 (+) | True | G328222 |
| TU388878 | lncRNA | downstream | 166790 | 7128166 ~ 7136722 (+) | True | G328260 |
| TU388910 | lncRNA | downstream | 284954 | 7246330 ~ 7247279 (+) | False | erp44 |
| TU388944 | lncRNA | downstream | 306358 | 7267734 ~ 7268762 (+) | False | G328313 |
| XM_026924097.2 | mRNA | upstream | 189737 | 6654775 ~ 6759822 (+) | True | LOC113532640 |
| XM_026924098.2 | mRNA | upstream | 189737 | 6654775 ~ 6759822 (+) | False | LOC113532640 |
| XM_026924697.2 | mRNA | upstream | 623199 | 6319087 ~ 6326360 (+) | True | upk1a |
| XM_034298203.1 | mRNA | upstream | 637001 | 6304581 ~ 6312558 (+) | True | zgc:101716 |
| XM_026924312.2 | mRNA | upstream | 865305 | 6066133 ~ 6084254 (+) | True | dpys |
| XM_034298057.1 | mRNA | downstream | 68405 | 7029781 ~ 7043670 (+) | True | tbrg4 |
| XM_034298058.1 | mRNA | downstream | 68582 | 7029958 ~ 7042817 (+) | False | tbrg4 |
| XM_034298248.1 | mRNA | downstream | 89276 | 7050652 ~ 7065149 (+) | False | nacad |
| XM_026924799.2 | mRNA | downstream | 89277 | 7050653 ~ 7065149 (+) | True | nacad |
| XM_026924800.2 | mRNA | downstream | 89277 | 7050653 ~ 7065149 (+) | False | nacad |
| TU387482 | other | upstream | 1611308 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU386814 | other | upstream | 2019405 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 2025878 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 2936021 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 4379820 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU389428 | other | downstream | 940416 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 1426811 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 1653697 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 1807369 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| XR_004576948.1 | other | downstream | 1807370 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
