Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU388824 |
| length | 665 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G328215 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 7031364 ~ 7032724 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU388687 | lncRNA | downstream | 290318 | 6648296 ~ 6741046 (-) | False | G328083 |
| TU388686 | lncRNA | downstream | 322597 | 6648296 ~ 6708767 (-) | True | G328083 |
| TU388498 | lncRNA | downstream | 700079 | 6256403 ~ 6331285 (-) | False | arhgap33 |
| TU388102 | lncRNA | downstream | 946715 | 6083366 ~ 6084649 (-) | True | G327560 |
| TU388047 | lncRNA | downstream | 1193087 | 5837883 ~ 5838277 (-) | True | G327508 |
| TU389090 | lncRNA | upstream | 344163 | 7376887 ~ 7378436 (-) | True | G328439 |
| TU389234 | lncRNA | upstream | 415449 | 7448173 ~ 7448967 (-) | True | G328565 |
| TU389231 | lncRNA | upstream | 417673 | 7450397 ~ 7452117 (-) | True | G328562 |
| TU389250 | lncRNA | upstream | 476145 | 7508869 ~ 7509107 (-) | True | G328580 |
| TU389258 | lncRNA | upstream | 525671 | 7558395 ~ 7558649 (-) | True | G328588 |
| XM_026924905.2 | mRNA | downstream | 1937 | 6954760 ~ 7029427 (-) | True | si:dkey-12j5.1 |
| XM_026924046.2 | mRNA | downstream | 82339 | 6944781 ~ 6949025 (-) | True | LOC113532609 |
| XM_026924578.2 | mRNA | downstream | 412691 | 6608684 ~ 6618673 (-) | True | steap4 |
| XM_026924883.2 | mRNA | downstream | 470262 | 6508334 ~ 6561102 (-) | False | mindy3 |
| XM_026924884.2 | mRNA | downstream | 470280 | 6508334 ~ 6561084 (-) | False | mindy3 |
| XM_026923905.2 | mRNA | upstream | 34274 | 7066998 ~ 7071362 (-) | True | glipr2l |
| XM_026924093.2 | mRNA | upstream | 42475 | 7075199 ~ 7086865 (-) | True | LOC113532636 |
| XM_026924579.2 | mRNA | upstream | 58817 | 7091541 ~ 7120969 (-) | True | tmem67 |
| XM_034298090.1 | mRNA | upstream | 91287 | 7124011 ~ 7137119 (-) | False | LOC113532854 |
| XM_034298089.1 | mRNA | upstream | 91287 | 7124011 ~ 7136959 (-) | True | LOC113532854 |
| trnam-cau_47 | other | downstream | 601432 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 1052985 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| TU388042 | other | downstream | 1053096 | 5876096 ~ 5978268 (-) | False | zfpm2a |
| TU387192 | other | downstream | 2053837 | 4963617 ~ 4977527 (-) | False | ubr5 |
| TU387191 | other | downstream | 2053911 | 4963617 ~ 4977453 (-) | False | ubr5 |
| TU388974 | other | upstream | 24070 | 7056794 ~ 7062428 (-) | True | G328342 |
| TU389089 | other | upstream | 346056 | 7378780 ~ 7386306 (-) | False | sec61b |
| XR_003404173.1 | other | upstream | 3252110 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 3490008 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 3890402 | 10923126 ~ 10930775 (-) | False | ackr4b |
