Item | Value |
---|---|
RNA id | XM_026924803.2 |
length | 2178 |
RNA type | mRNA |
GC content | 0.45 |
exon number | 11 |
gene id | erp44 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 7224022 ~ 7247279 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0045454 | cell redox homeostasis | biological_process |
id | description |
---|---|
K17264 | ERP44, TXNDC4; endoplasmic reticulum resident protein 44 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU388878 | lncRNA | upstream | 87300 | 7128166 ~ 7136722 (+) | True | G328260 |
TU388835 | lncRNA | upstream | 178744 | 7045046 ~ 7045278 (+) | True | G328222 |
TU388815 | lncRNA | upstream | 194621 | 7023155 ~ 7029401 (+) | True | G328208 |
TU388766 | lncRNA | upstream | 262646 | 6949559 ~ 6961376 (+) | True | G328161 |
TU388624 | lncRNA | upstream | 515243 | 6648280 ~ 6708779 (+) | True | G328024 |
TU388944 | lncRNA | downstream | 21366 | 7267734 ~ 7268762 (+) | False | G328313 |
TU388945 | lncRNA | downstream | 21366 | 7267734 ~ 7268762 (+) | True | G328313 |
TU389077 | lncRNA | downstream | 126912 | 7373280 ~ 7373500 (+) | True | G328427 |
TU389095 | lncRNA | downstream | 145873 | 7392241 ~ 7392448 (+) | True | G328441 |
TU389297 | lncRNA | downstream | 410773 | 7657141 ~ 7659079 (+) | True | G328620 |
XM_034297851.1 | mRNA | upstream | 38957 | 7153823 ~ 7185065 (+) | True | tex10 |
XM_034297850.1 | mRNA | upstream | 38957 | 7154176 ~ 7185065 (+) | False | tex10 |
XM_026924580.2 | mRNA | upstream | 100631 | 7121016 ~ 7123391 (+) | True | rbm12ba |
XM_034298248.1 | mRNA | upstream | 158873 | 7050652 ~ 7065149 (+) | False | nacad |
XM_026924799.2 | mRNA | upstream | 158873 | 7050653 ~ 7065149 (+) | True | nacad |
XM_026924704.2 | mRNA | downstream | 140212 | 7386580 ~ 7390884 (+) | True | alg2 |
XM_026924705.2 | mRNA | downstream | 140212 | 7386580 ~ 7390884 (+) | False | alg2 |
XM_026924642.2 | mRNA | downstream | 171006 | 7417374 ~ 7424191 (+) | True | LOC113532919 |
XM_034298069.1 | mRNA | downstream | 179911 | 7426279 ~ 7451187 (+) | True | tmem245 |
XM_034298070.1 | mRNA | downstream | 179912 | 7426280 ~ 7451187 (+) | False | tmem245 |
TU387482 | other | upstream | 1885771 | 5332268 ~ 5338251 (+) | True | G326997 |
TU386814 | other | upstream | 2293868 | 4924786 ~ 4930154 (+) | True | srsf10a |
TU386810 | other | upstream | 2300341 | 4920980 ~ 4923681 (+) | True | fabp10a |
TU386582 | other | upstream | 3210484 | 4011410 ~ 4013538 (+) | False | hamp |
TU385671 | other | upstream | 4654283 | 2565700 ~ 2569739 (+) | False | G325435 |
TU389428 | other | downstream | 655424 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
XR_004576973.1 | other | downstream | 1141819 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
TU389909 | other | downstream | 1368705 | 8615073 ~ 8665836 (+) | False | G329111 |
XR_004576949.1 | other | downstream | 1522377 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
XR_004576948.1 | other | downstream | 1522378 | 8768746 ~ 8819267 (+) | False | LOC113532648 |