Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU389077 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G328427 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 7373280 ~ 7373500 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU388944 | lncRNA | upstream | 104518 | 7267734 ~ 7268762 (+) | False | G328313 |
| TU388945 | lncRNA | upstream | 104518 | 7267734 ~ 7268762 (+) | True | G328313 |
| TU388910 | lncRNA | upstream | 126001 | 7246330 ~ 7247279 (+) | False | erp44 |
| TU388878 | lncRNA | upstream | 236558 | 7128166 ~ 7136722 (+) | True | G328260 |
| TU388835 | lncRNA | upstream | 328002 | 7045046 ~ 7045278 (+) | True | G328222 |
| TU389095 | lncRNA | downstream | 18741 | 7392241 ~ 7392448 (+) | True | G328441 |
| TU389297 | lncRNA | downstream | 283641 | 7657141 ~ 7659079 (+) | True | G328620 |
| TU389473 | lncRNA | downstream | 731762 | 8105262 ~ 8105462 (+) | True | G328750 |
| TU389477 | lncRNA | downstream | 761580 | 8135080 ~ 8135455 (+) | True | G328754 |
| TU389478 | lncRNA | downstream | 762017 | 8135517 ~ 8136163 (+) | True | G328755 |
| XM_026924803.2 | mRNA | upstream | 126912 | 7224022 ~ 7246368 (+) | True | erp44 |
| XM_026924804.2 | mRNA | upstream | 126912 | 7224022 ~ 7246368 (+) | False | erp44 |
| XM_034297851.1 | mRNA | upstream | 188215 | 7153823 ~ 7185065 (+) | True | tex10 |
| XM_034297850.1 | mRNA | upstream | 188215 | 7154176 ~ 7185065 (+) | False | tex10 |
| XM_026924580.2 | mRNA | upstream | 249889 | 7121016 ~ 7123391 (+) | True | rbm12ba |
| XM_026924704.2 | mRNA | downstream | 13080 | 7386580 ~ 7390884 (+) | True | alg2 |
| XM_026924705.2 | mRNA | downstream | 13080 | 7386580 ~ 7390884 (+) | False | alg2 |
| XM_026924642.2 | mRNA | downstream | 43874 | 7417374 ~ 7424191 (+) | True | LOC113532919 |
| XM_034298069.1 | mRNA | downstream | 52779 | 7426279 ~ 7451187 (+) | True | tmem245 |
| XM_034298070.1 | mRNA | downstream | 52780 | 7426280 ~ 7451187 (+) | False | tmem245 |
| TU387482 | other | upstream | 2035029 | 5332268 ~ 5338251 (+) | True | G326997 |
| TU386814 | other | upstream | 2443126 | 4924786 ~ 4930154 (+) | True | srsf10a |
| TU386810 | other | upstream | 2449599 | 4920980 ~ 4923681 (+) | True | fabp10a |
| TU386582 | other | upstream | 3359742 | 4011410 ~ 4013538 (+) | False | hamp |
| TU385671 | other | upstream | 4803541 | 2565700 ~ 2569739 (+) | False | G325435 |
| TU389428 | other | downstream | 528292 | 7901792 ~ 7902608 (+) | False | LOC113532663 |
| XR_004576973.1 | other | downstream | 1014687 | 8388187 ~ 8484833 (+) | False | LOC113532774 |
| TU389909 | other | downstream | 1241573 | 8615073 ~ 8665836 (+) | False | G329111 |
| XR_004576949.1 | other | downstream | 1395245 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| XR_004576948.1 | other | downstream | 1395246 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
